RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MEI1Q5TIA1 1274 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 SGF29Q96ES7 293 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 SAE1Q9UBE0 346 aaPredicted RBP14.23□□□□□ -0.13
SMC6-201ENST00000351948 ATRNL1Q5VV63 1379 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 KCNK1O00180 336 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 FBXO21O94952 628 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 PTPN1P18031 435 aaKnown RBP14.23□□□□□ -0.13
SMC6-201ENST00000351948 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
SMC6-201ENST00000351948 PLD1Q13393 1074 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 PDAP1Q13442 181 aaKnown RBP14.23□□□□□ -0.13
SMC6-201ENST00000351948 MUM1Q2TAK8 710 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 SIAH1Q8IUQ4 282 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 ZIM3Q96PE6 472 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 GMLQ99445 158 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 VCXQ9H320 206 aa14.23□□□□□ -0.13
SMC6-201ENST00000351948 CRYBB1P53674 252 aaPredicted RBP14.22□□□□□ -0.13
SMC6-201ENST00000351948 MFSD7Q6UXD7 560 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 DDIASQ8IXT1 998 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 PPIL6Q8IXY8 311 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 FBXO25Q8TCJ0 367 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 ERFP50548 548 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 GTF2A1P52655 376 aaPredicted RBP14.22□□□□□ -0.13
SMC6-201ENST00000351948 IMPG1Q17R60 797 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 TTC23LQ6PF05 361 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 PRMT1Q99873 361 aaKnown RBP14.22□□□□□ -0.13
SMC6-201ENST00000351948 NT5MQ9NPB1 228 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 FAM105AQ9NUU6 356 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 APOBEC2Q9Y235 224 aaKnown RBP14.22□□□□□ -0.13
SMC6-201ENST00000351948 RPS6KL1Q9Y6S9 549 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 SNED1Q8TER0 1413 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 CDH16O75309 829 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 ESRRBO95718 433 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 POLBP06746 335 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
SMC6-201ENST00000351948 HS6ST3Q8IZP7 471 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 MMGT1Q8N4V1 131 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 C7orf43Q8WVR3 580 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 KRT35Q92764 455 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 APOL5Q9BWW9 433 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 ISCUQ9H1K1 167 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 TUBGCP4Q9UGJ1 667 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 YWHAQP27348 245 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 HIBCHQ6NVY1 386 aaPredicted RBP14.22□□□□□ -0.13
SMC6-201ENST00000351948 LLGL2Q6P1M3 1020 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 LRRN4CLQ8ND94 238 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 RNF217Q8TC41 542 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 SLC39A10Q9ULF5 831 aa14.22□□□□□ -0.13
SMC6-201ENST00000351948 MIPP30301 263 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 LRRN4Q8WUT4 740 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 TLR8Q9NR97 1041 aaKnown RBP14.21□□□□□ -0.13
SMC6-201ENST00000351948 BCAP29Q9UHQ4 241 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.21□□□□□ -0.13
SMC6-201ENST00000351948 IPPQ9Y573 584 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 CNTNAP1P78357 1384 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 LBRQ14739 615 aaKnown RBP14.21□□□□□ -0.13
SMC6-201ENST00000351948 ZACNQ401N2 412 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 NOMO2Q5JPE7 1267 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 SEMA4DQ92854 862 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 TASP1Q9H6P5 420 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 WRAP73Q9P2S5 460 aaPredicted RBP14.21□□□□□ -0.13
SMC6-201ENST00000351948 UMODL1Q5DID0 1318 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 RHOCP08134 193 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 CCR1P32246 355 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 TBX4P57082 545 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 MAP7Q14244 749 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 ATP13A4Q4VNC1 1196 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 HYIQ5T013 277 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 TRMT10CQ7L0Y3 403 aaKnown RBP14.21□□□□□ -0.13
SMC6-201ENST00000351948 STAMBPL1Q96FJ0 436 aa14.21□□□□□ -0.13
SMC6-201ENST00000351948 MRPL9Q9BYD2 267 aaKnown RBP14.21□□□□□ -0.13
SMC6-201ENST00000351948 TCP11X1B4DZS4 312 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 RNF225M0QZC1 329 aaPredicted RBP14.21□□□□□ -0.14
SMC6-201ENST00000351948 STIP1P31948 543 aaKnown RBP14.21□□□□□ -0.14
SMC6-201ENST00000351948 SCNN1BP51168 640 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 PDK2Q15119 407 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 NAPEPLDQ6IQ20 393 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 SPATS2Q86XZ4 545 aaKnown RBP14.21□□□□□ -0.14
SMC6-201ENST00000351948 IRF2BP1Q8IU81 584 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 EXD1Q8NHP7 514 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 ARL8AQ96BM9 186 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 TLR10Q9BXR5 811 aa14.21□□□□□ -0.14
SMC6-201ENST00000351948 GMNCA6NCL1 334 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 IGFBP4P22692 258 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 OXCT1P55809 520 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 RBBP7Q16576 425 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 NETO2Q8NC67 525 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 LYPLA2O95372 231 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 PAEPP09466 180 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 SPATA31D3P0C874 917 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 CHRM3P20309 590 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 TGM2P21980 687 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 RFC1P35251 1148 aaPredicted RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 FNTAP49354 379 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 RABGAP1LQ5R372 815 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 ERMARDQ5T6L9 678 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 PAPD7Q5XG87 772 aaKnown RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 SPATA31D4Q6ZUB0 917 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 GANQ9H2C0 597 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms