RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SEC24CP53992 1094 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 DPYSL3Q14195 570 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 KRT81Q14533 505 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 CDO1Q16878 200 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 ERMARDQ5T6L9 678 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 CENPUQ71F23 418 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 SLC26A9Q7LBE3 791 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 PPIL6Q8IXY8 311 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 HACE1Q8IYU2 909 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 ADGRF2Q8IZF7 708 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 ARRDC4Q8NCT1 418 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 FAM172AQ8WUF8 416 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 C9orf72Q96LT7 481 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 RNF157Q96PX1 679 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 XPO6Q96QU8 1125 aaKnown RBP17.45■□□□□ 0.38
SAMM50-201ENST00000350028 FAM107BQ9H098 131 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 SPC25Q9HBM1 224 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 NGRNQ9NPE2 291 aaKnown RBP17.45■□□□□ 0.38
SAMM50-201ENST00000350028 GTF2IRD1Q9UHL9 959 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 LGALS13Q9UHV8 139 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 CDY2AQ9Y6F7 541 aa17.45■□□□□ 0.38
SAMM50-201ENST00000350028 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 ZNF487B1APH4 448 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 ALOX15BO15296 676 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 AOC2O75106 756 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RPLP2P05387 115 aaKnown RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RBP3P10745 1247 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 CYBAP13498 195 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 CCDC130P13994 396 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 CHN1P15882 459 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 LMO2P25791 158 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 STIP1P31948 543 aaKnown RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RPL22P35268 128 aaKnown RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 LILRA4P59901 499 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 ATP11AP98196 1134 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 NOMO1Q15155 1222 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 SCYL2Q6P3W7 929 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 SRLQ86TD4 932 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RIBC1Q8N443 379 aaPredicted RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 PRCCQ92733 491 aaPredicted RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 PPP1R10Q96QC0 940 aaKnown RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 LPIN3Q9BQK8 851 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 GOLGA2P5Q9HBQ8 144 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 CHST12Q9NRB3 414 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RRP15Q9Y3B9 282 aaKnown RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 FARP1Q9Y4F1 1045 aaPredicted RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 MDM4O15151 490 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 CA12O43570 354 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 CTGFP29279 349 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 TM4SF4P48230 202 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 FCGRTP55899 365 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 NKX3-2P78367 333 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 NBPF20Q3BBV1 942 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RAB6CQ53S08 254 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 EXOC3L1Q86VI1 746 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 UNC45BQ8IWX7 931 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 MDM1Q8TC05 714 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 SPATA18Q8TC71 538 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 P3H4Q92791 437 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 ARHGEF2Q92974 986 aaKnown RBP17.44■□□□□ 0.38
SAMM50-201ENST00000350028 RAB6CQ9H0N0 254 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 SLC38A7Q9NVC3 462 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 GGA2Q9UJY4 613 aa17.44■□□□□ 0.38
SAMM50-201ENST00000350028 PTGESO14684 152 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 HCRTO43612 131 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 CDH16O75309 829 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 TGM2P21980 687 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 PSMC4P43686 418 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 CTCFP49711 727 aaPredicted RBP17.43■□□□□ 0.38
SAMM50-201ENST00000350028 ROR1Q01973 937 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 DARS2Q6PI48 645 aaKnown RBP17.43■□□□□ 0.38
SAMM50-201ENST00000350028 CENPIQ92674 756 aaPredicted RBP17.43■□□□□ 0.38
SAMM50-201ENST00000350028 HNRNPABQ99729 332 aaKnown RBP17.43■□□□□ 0.38
SAMM50-201ENST00000350028 B3GNT5Q9BYG0 378 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 PCDH18Q9HCL0 1135 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 INTS9Q9NV88 658 aaKnown RBP17.43■□□□□ 0.38
SAMM50-201ENST00000350028 ST3GAL5Q9UNP4 418 aa17.43■□□□□ 0.38
SAMM50-201ENST00000350028 CYB561D2O14569 222 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 XPO1O14980 1071 aaKnown RBP17.42■□□□□ 0.38
SAMM50-201ENST00000350028 GDF10P55107 478 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 DEFB115Q30KQ5 88 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 EFHC1Q5JVL4 640 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 CXCL17Q6UXB2 119 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 MICALCLQ6ZW33 695 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 PAXIP1Q6ZW49 1069 aaPredicted RBP17.42■□□□□ 0.38
SAMM50-201ENST00000350028 RPAINQ86UA6 219 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 OSTM1Q86WC4 334 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 NAT8LQ8N9F0 302 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 SLC2A14Q8TDB8 520 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 CPT1BQ92523 772 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 CAPNS2Q96L46 248 aa17.42■□□□□ 0.38
SAMM50-201ENST00000350028 C11orf84Q9BUA3 381 aaPredicted RBP17.42■□□□□ 0.38
SAMM50-201ENST00000350028 SNRNP25Q9BV90 132 aaKnown RBP17.42■□□□□ 0.38
SAMM50-201ENST00000350028 PPCSQ9HAB8 311 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms