RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SH2D3CQ8N5H7 860 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 RUSC1Q9BVN2 902 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 LZTS1Q9Y250 596 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 IQGAP3Q86VI3 1631 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 CDC42BPBQ9Y5S2 1711 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 UBE2Q2LH0YL09 131 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 FXR1P51114 621 aaKnown RBP eCLIP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 EFEMP1Q12805 493 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ELAVL2Q12926 359 aaKnown RBP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ACSF2Q96CM8 615 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 SYBUQ9NX95 663 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ZNF711Q9Y462 761 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ZBTB39O15060 712 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 NUDT2P50583 147 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 CNBD2Q96M20 576 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 hCG_2014768A0A024R1R8 64 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 SLC13A5Q86YT5 568 aaPredicted RBP23.86■■□□□ 1.41
NPAS3-201ENST00000346562 SUGP1Q8IWZ8 645 aaKnown RBP23.86■■□□□ 1.41
NPAS3-201ENST00000346562 OR2W6PQ8NHA6 318 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 STARD7Q9NQZ5 370 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 PPP2R3BQ9Y5P8 575 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 SLC12A8A0AV02 714 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.86■■□□□ 1.41
NPAS3-201ENST00000346562 IRAK1BP1Q5VVH5 260 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 GJB7Q6PEY0 223 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 PRRG3Q9BZD7 231 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 LRRC40Q9H9A6 602 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 THG1LQ9NWX6 298 aaKnown RBP23.86■■□□□ 1.41
NPAS3-201ENST00000346562 PLA2G4CQ9UP65 541 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 RAD54BQ9Y620 910 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 CCND1P24385 295 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 KLK7P49862 253 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 SLC26A2P50443 739 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 MICU2Q8IYU8 434 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 ZNF614Q8N883 585 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 MORC2Q9Y6X9 1032 aaPredicted RBP23.86■■□□□ 1.41
NPAS3-201ENST00000346562 MGAT4DA6NG13 374 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 RENBPP51606 427 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 ARHGAP17Q68EM7 881 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 FAM180AQ6UWF9 173 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 TRIM10Q9UDY6 481 aa23.86■■□□□ 1.41
NPAS3-201ENST00000346562 STRNO43815 780 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 PWP1Q13610 501 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 TRIM71Q2Q1W2 868 aaKnown RBP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 MOXD1Q6UVY6 613 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 CCDC81Q6ZN84 652 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 DTNBP1Q96EV8 351 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 IARS2Q9NSE4 1012 aaKnown RBP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 IFRD1O00458 451 aaPredicted RBP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 RIN3Q8TB24 985 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 ANKRD49Q8WVL7 239 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 VMP1Q96GC9 406 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 NLNQ9BYT8 704 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 CELF4Q9BZC1 486 aaKnown RBP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 PREPLQ4J6C6 727 aaPredicted RBP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 ALFQ53S48 1182 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 THAP2Q9H0W7 228 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 TLR8Q9NR97 1041 aaKnown RBP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 TBC1D13Q9NVG8 400 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 STMN3Q9NZ72 180 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 CTNNAL1Q9UBT7 734 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 GTF2A1LQ9UNN4 478 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 HNRNPCP07910 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
NPAS3-201ENST00000346562 FAM172AQ8WUF8 416 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 ANKS1AQ92625 1134 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 CPB2Q96IY4 423 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 CLTCL1P53675 1640 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 RAB27AP51159 221 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 MTSS1LQ765P7 747 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 FICDQ9BVA6 458 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 ARMC7Q9H6L4 198 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 SOX13Q9UN79 622 aa23.85■■□□□ 1.41
NPAS3-201ENST00000346562 WDR49Q8IV35 697 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 TPCN2Q8NHX9 752 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 KANSL3Q9P2N6 904 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 KLC1Q07866 573 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 DPF3Q92784 378 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 BBS2Q9BXC9 721 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 STARD3Q14849 445 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 RSPH1Q8WYR4 309 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 QRICH2Q9H0J4 1663 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 CNTFP26441 200 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 CLCN3P51790 818 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 TFDP3Q5H9I0 405 aa23.84■■□□□ 1.41
NPAS3-201ENST00000346562 TTC33Q6PID6 262 aaPredicted RBP23.84■■□□□ 1.41
NPAS3-201ENST00000346562 COL23A1Q86Y22 540 aaPredicted RBP23.84■■□□□ 1.41
NPAS3-201ENST00000346562 FBXO16Q8IX29 292 aaPredicted RBP23.84■■□□□ 1.41
NPAS3-201ENST00000346562 PSMD12O00232 456 aaPredicted RBP23.83■■□□□ 1.41
NPAS3-201ENST00000346562 GLP2RO95838 553 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 VTNP04004 478 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 SKAP2O75563 359 aaPredicted RBP23.83■■□□□ 1.41
NPAS3-201ENST00000346562 SGPL1O95470 568 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 GTF2E2P29084 291 aaKnown RBP23.83■■□□□ 1.41
NPAS3-201ENST00000346562 BACE1P56817 501 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 ANTXR2P58335 489 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 CCZ1BP86790 482 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 CCZ1P86791 482 aaPredicted RBP23.83■■□□□ 1.41
NPAS3-201ENST00000346562 ERGIC2Q96RQ1 377 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 SLC24A3Q9HC58 644 aa23.83■■□□□ 1.41
NPAS3-201ENST00000346562 SCAF8Q9UPN6 1271 aaKnown RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms