RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 IER5LQ5T953 404 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 SFMBT2Q5VUG0 894 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 E4F1Q66K89 784 aaPredicted RBP14.59□□□□□ -0.07
TPM4-202ENST00000344824 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
TPM4-202ENST00000344824 TXNDC8Q6A555 127 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 OR8K1Q8NGG5 319 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 DEPDC1BQ8WUY9 529 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 TRMT61BQ9BVS5 477 aaKnown RBP14.59□□□□□ -0.07
TPM4-202ENST00000344824 STK33Q9BYT3 514 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 BCO2Q9BYV7 579 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 TASP1Q9H6P5 420 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 F8VZ95 297 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 TADA3O75528 432 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 AP1G2O75843 785 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 ABL1P00519 1130 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 F11P03951 625 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 PSMC3P17980 439 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 TBXAS1P24557 533 aaPredicted RBP14.58□□□□□ -0.07
TPM4-202ENST00000344824 STAT1P42224 750 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 CACNA2D1P54289 1103 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 JAM2P57087 298 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 MLF2Q15773 248 aaPredicted RBP14.58□□□□□ -0.07
TPM4-202ENST00000344824 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.07
TPM4-202ENST00000344824 TPRG1Q6ZUI0 275 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 LRRC8AQ8IWT6 810 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 SLC2A14Q8TDB8 520 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 RSPRY1Q96DX4 576 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 TRIM44Q96DX7 344 aaPredicted RBP14.58□□□□□ -0.07
TPM4-202ENST00000344824 TRMT2BQ96GJ1 504 aaKnown RBP14.58□□□□□ -0.07
TPM4-202ENST00000344824 SMARCD1Q96GM5 515 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 TWNKQ96RR1 684 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 ZNHIT6Q9NWK9 470 aaKnown RBP14.58□□□□□ -0.07
TPM4-202ENST00000344824 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 DAAM1Q9Y4D1 1078 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 PCDHB4Q9Y5E5 795 aa14.58□□□□□ -0.07
TPM4-202ENST00000344824 FOXN3O00409 490 aaPredicted RBP14.58□□□□□ -0.08
TPM4-202ENST00000344824 ZNF263O14978 683 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 CKMP06732 381 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 SKILP12757 684 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 AVPR2P30518 371 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 SOX5P35711 763 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 USP46P62068 366 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 GCNT1Q02742 428 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 UBXN2BQ14CS0 331 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 ENOSF1Q7L5Y1 443 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 TMEM150AQ86TG1 271 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 UNC93AQ86WB7 457 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 CMTM8Q8IZV2 173 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 TMEM105Q8N8V8 129 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 C12orf29Q8N999 325 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 E2F7Q96AV8 911 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 SPATA17Q96L03 361 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 PANX2Q96RD6 677 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 DNAJC7Q99615 494 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 NT5C1AQ9BXI3 368 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 FOXQ1Q9C009 403 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 CYP3A43Q9HB55 503 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 DMAP1Q9NPF5 467 aaPredicted RBP14.58□□□□□ -0.08
TPM4-202ENST00000344824 HEBP1Q9NRV9 189 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 TMEM30AQ9NV96 361 aa14.58□□□□□ -0.08
TPM4-202ENST00000344824 F5P12259 2224 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 CALCAP01258 141 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 NPR3P17342 541 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 CD72P21854 359 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 DDX6P26196 483 aaKnown RBP eCLIP14.57□□□□□ -0.081e-6■□□□□ 10.8
TPM4-202ENST00000344824 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 SLC44A4Q53GD3 710 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 TDRD12Q587J7 1177 aaKnown RBP14.57□□□□□ -0.08
TPM4-202ENST00000344824 MFSD6LQ8IWD5 586 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 TTC8Q8TAM2 541 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 CSGALNACT1Q8TDX6 532 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 SHC3Q92529 594 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 IRF7Q92985 503 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 SHDQ96IW2 340 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 ZFYVE19Q96K21 471 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 C8orf48Q96LL4 319 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 FAM81BQ96LP2 452 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 KCNK16Q96T55 309 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 BAG1Q99933 345 aaPredicted RBP14.57□□□□□ -0.08
TPM4-202ENST00000344824 SLC46A2Q9BY10 475 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 DNAI2Q9GZS0 605 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 NUCKS1Q9H1E3 243 aaKnown RBP14.57□□□□□ -0.08
TPM4-202ENST00000344824 KCNF1Q9H3M0 494 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 TRPV4Q9HBA0 871 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 TRPM5Q9NZQ8 1165 aa14.57□□□□□ -0.08
TPM4-202ENST00000344824 TRAV19A0A0A6YYK7 116 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 C2orf78A6NCI8 922 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 CYP26A1O43174 497 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 PI15O43692 258 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 CILPO75339 1184 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 FAM200BP0CF97 657 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 FERP16591 822 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 AOC1P19801 751 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 MAP3K7CLP57077 242 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 WDR59Q6PJI9 974 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 TMEM270Q6UE05 265 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 BPIFB1Q8TDL5 484 aa14.56□□□□□ -0.08
TPM4-202ENST00000344824 DNASE1L2Q92874 299 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms