RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GRIK3Q13003 919 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 TSNAXIP1Q2TAA8 658 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 TPGS1Q6ZTW0 290 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 PDLIM2Q96JY6 352 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 ACO2Q99798 780 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 ARHGEF38Q9NXL2 777 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 CASZ1Q86V15 1759 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 SATB1Q01826 763 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 PDAP1Q13442 181 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 RCN2Q14257 317 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 NT5DC1Q5TFE4 455 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
SMARCA4-201ENST00000344626 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 CBX4O00257 560 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 ZNF263O14978 683 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 TUSC3Q13454 348 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 ZNF268Q14587 947 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 MEI1Q5TIA1 1274 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 TATDN2Q93075 761 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 TARSL2A2RTX5 802 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 PHF20L1A8MW92 1017 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 TBX4P57082 545 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 NCAPHQ15003 741 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 RBM43Q6ZSC3 357 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 ZFP42Q96MM3 310 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 ZC3H7BQ9UGR2 993 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 ZNF112Q9UJU3 913 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 IRS2Q9Y4H2 1338 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 PCDH8O95206 1070 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 PYGLP06737 847 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 DENND5BQ6ZUT9 1274 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 HSD17B14Q9BPX1 270 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 GTSE1Q9NYZ3 720 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 AAR2Q9Y312 384 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 MRFAP1Q9Y605 127 aa17.02■□□□□ 0.32
SMARCA4-201ENST00000344626 KCNA2P16389 499 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 PHEXP78562 749 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 PTK7Q13308 1070 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 SYCP2LQ5T4T6 812 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 CDKAL1Q5VV42 579 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 OLFML2BQ68BL8 750 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 RAD9BQ6WBX8 426 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 POLBP06746 335 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 ADIGQ0VDE8 80 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 ACAD11Q709F0 780 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.31
SMARCA4-201ENST00000344626 RGS4P49798 205 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 SERPINB9P50453 376 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 JAG1P78504 1218 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 FASTKD1Q53R41 847 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 DCLRE1AQ6PJP8 1040 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 TSHZ1Q6ZSZ6 1077 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 SLC47A2Q86VL8 602 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 CCNYL1Q8N7R7 359 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 TPCN2Q8NHX9 752 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 TMA16Q96EY4 203 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 PPCSQ9HAB8 311 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 CNTNAP1P78357 1384 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 IGKV6D-41A0A0C4DH26 115 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 NFICP08651 508 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 NCF2P19878 526 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 SARSP49591 514 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 ZNF606Q8WXB4 792 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 VCPIP1Q96JH7 1222 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 C11orf84Q9BUA3 381 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 BRD9Q9H8M2 597 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 STK39Q9UEW8 545 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 KIF3CO14782 793 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 KCNA1Q09470 495 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 PTK6Q13882 451 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 GRB14Q14449 540 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 KIF19Q2TAC6 998 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 HP1BP3Q5SSJ5 553 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 CFAP61Q8NHU2 1237 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 RXFP2Q8WXD0 754 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 CARD9Q9H257 536 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 GOLPH3Q9H4A6 298 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 C2orf81A6NN90 581 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 STX7O15400 261 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 CCZ1BP86790 482 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 CCZ1P86791 482 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 MTFR1Q15390 333 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 TBCCQ15814 346 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 E2F4Q16254 413 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 MFN1Q8IWA4 741 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 ZSWIM1Q9BR11 485 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 STK38LQ9Y2H1 464 aa17.01■□□□□ 0.31
SMARCA4-201ENST00000344626 NCAM2O15394 837 aa17■□□□□ 0.31
SMARCA4-201ENST00000344626 GRM5P41594 1212 aa17■□□□□ 0.31
SMARCA4-201ENST00000344626 YWHAZP63104 245 aaKnown RBP17■□□□□ 0.31
SMARCA4-201ENST00000344626 PTRHD1Q6GMV3 140 aaKnown RBP17■□□□□ 0.31
SMARCA4-201ENST00000344626 RETSATQ6NUM9 610 aa17■□□□□ 0.31
SMARCA4-201ENST00000344626 GET4Q7L5D6 327 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms