RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 LINS1Q8NG48 757 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PTPRN2Q92932 1015 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 ZHX1-C8orf76Q96EF9 292 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 DGCR6LQ9BY27 220 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 SYNDIG1Q9H7V2 258 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 PHTF1Q9UMS5 762 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 FPGT-TNNI3KV9GXZ4 949 aa6.36□□□□□ -1.39
VCAN-203ENST00000343200 USP27XA6NNY8 438 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ATP1A3P13637 1013 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 NFYCQ13952 458 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PERM1Q5SV97 790 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARHGEF16Q5VV41 709 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MEIOBQ8N635 442 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZBTB38Q8NAP3 1195 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZNF671Q8TAW3 534 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MAGEC3Q8TD91 643 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZNF333Q96JL9 665 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ISCUQ9H1K1 167 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZNF532Q9HCE3 1301 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARHGEF10O15013 1369 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CYP2D7A0A087X1C5 515 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SUPT3HB4E1H0 165 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 TFECO14948 347 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 H2AFXP16104 143 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 MAGEA12P43365 314 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CRKP46108 304 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 RPS7P62081 194 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 CCZ1BP86790 482 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CCZ1P86791 482 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 VMACQ2NL98 169 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CCSAPQ6IQ19 270 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARMCX2Q7L311 632 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 DGKHQ86XP1 1220 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 HDDC3Q8N4P3 179 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 HTRA1Q92743 480 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PGBD4Q96DM1 585 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 UBP1Q9NZI7 540 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 GIT1Q9Y2X7 761 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 POLBP06746 335 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 FAM153BP0C7A2 387 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MYCLP12524 364 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 AKR1B1P15121 316 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 HOXB6P17509 224 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 NOS3P29474 1203 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PWP1Q13610 501 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 TFDP1Q14186 410 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 GALNT3Q14435 633 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PTGES3Q15185 160 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 FAM83EQ2M2I3 478 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SAMD4BQ5PRF9 694 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 C3orf62Q6ZUJ4 267 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SLC13A5Q86YT5 568 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 RNF26Q9BY78 433 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 ROGDIQ9GZN7 287 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 RMND5AQ9H871 391 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARMT1Q9H993 441 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CLIC5Q9NZA1 410 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 DBR1Q9UK59 544 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 A0A1W2PQC6 194 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 FAM25EA8MYX2 175 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 hCG_1984214I3L0E3 225 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 KPNA3O00505 521 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZBTB5O15062 677 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MAGEA8P43361 318 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARSHQ5FYA8 562 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PLET1Q6UQ28 207 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 TMPRSS6Q8IU80 811 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MAPKAPK5Q8IW41 473 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 C8orf59Q8N0T1 100 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 E2F7Q96AV8 911 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 VPS33AQ96AX1 596 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 TMCO6Q96DC7 493 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 S100A13Q99584 98 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 TNNQ9UQP3 1299 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CHKBQ9Y259 395 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 NPC1L1Q9UHC9 1359 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZC3H11AO75152 810 aaKnown RBP eCLIP6.35□□□□□ -1.39
VCAN-203ENST00000343200 MAPK1P28482 360 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SEC24CP53992 1094 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 CDH4P55283 916 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARF3P61204 181 aaPredicted RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARF1P84077 181 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 TFDP2Q14188 446 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 MAPK6Q16659 721 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SULT1C3Q6IMI6 304 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PI4K2BQ8TCG2 481 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ARHGEF26Q96DR7 871 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 PUS7LQ9H0K6 701 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 PABPC3Q9H361 631 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 TRIM10Q9UDY6 481 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 POGZQ7Z3K3 1410 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 HEATR9A2RTY3 570 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 KDM4BO94953 1096 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ZNF682O95780 498 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 SNRPAP09012 282 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 GSTM1P09488 218 aa6.35□□□□□ -1.39
VCAN-203ENST00000343200 ACAT1P24752 427 aaKnown RBP6.35□□□□□ -1.39
VCAN-203ENST00000343200 TFAMQ00059 246 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms