RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 PCYOX1Q9UHG3 505 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 USP18Q9UMW8 372 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 hCG_1818297A0A087WSY0 165 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 TRIM43BA6NCK2 446 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 TBKBP1A7MCY6 615 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 SASH3O75995 380 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 CHRNA3P32297 505 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 COILP38432 576 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 PTPN9P43378 593 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 MRPS5P82675 430 aaKnown RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 ATP11AP98196 1134 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 YWHAHQ04917 246 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 PPP2R5EQ16537 467 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 CDO1Q16878 200 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 OTUD1Q5VV17 481 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 CNKSR3Q6P9H4 555 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 BHLHA9Q7RTU4 235 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 TMEM173Q86WV6 379 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 CMASQ8NFW8 434 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 BCL7CQ8WUZ0 217 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 ATG4AQ8WYN0 398 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 SEC14L1Q92503 715 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 TRIM43Q96BQ3 446 aaPredicted RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 SMARCD1Q96GM5 515 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 DDX23Q9BUQ8 820 aaKnown RBP17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 FUT8Q9BYC5 575 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 UBXN6Q9BZV1 441 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 CALCOCO1Q9P1Z2 691 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 ADAM28Q9UKQ2 775 aa17.98■□□□□ 0.47
FRMD4A-202ENST00000342409 ARHGEF37A1IGU5 675 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 LRRD1A4D1F6 860 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 HOXA2O43364 376 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 RNF8O76064 485 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 KRT7P08729 469 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 CD48P09326 243 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 OR4Q2P0C623 313 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 BDNFP23560 247 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 MCM3P25205 808 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 ECHS1P30084 290 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 PBX3P40426 434 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 KCNJ1P48048 391 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 ARSEP51690 589 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 TKTL1P51854 596 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 HDAC4P56524 1084 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 SLC8A3P57103 927 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 COPS2P61201 443 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 MRPL58Q14197 206 aaKnown RBP17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 HADHQ16836 314 aaKnown RBP17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 HFE2Q6ZVN8 426 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 THEM5Q8N1Q8 247 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 CCDC26Q8TAB7 109 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 FAM172AQ8WUF8 416 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 ULBP1Q9BZM6 244 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 DCLK3Q9C098 648 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 MTUS1Q9ULD2 1270 aa17.97■□□□□ 0.47
FRMD4A-202ENST00000342409 ERLIN1O75477 346 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 TADA2AO75478 443 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 ENDOD1O94919 500 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 FYNP06241 537 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 GALTP07902 379 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 KDELR1P24390 212 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 SDC4P31431 198 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 ATXN1P54253 815 aaKnown RBP17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 DAOAP59103 153 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 PITX1P78337 314 aaPredicted RBP17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 DR1Q01658 176 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 EFHC1Q5JVL4 640 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 CCDC137Q6PK04 289 aaKnown RBP17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 MAATS1Q7Z4T9 603 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 DDX42Q86XP3 938 aaKnown RBP eCLIP17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 IFT20Q8IY31 132 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 B3GALT6Q96L58 329 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 ZCWPW1Q9H0M4 648 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 LRRC4Q9HBW1 653 aa17.96■□□□□ 0.47
FRMD4A-202ENST00000342409 NT5C1B-RDH14C9J2C7 533 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 DAB1O75553 588 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 FGFR3P22607 806 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 TSPY1Q01534 308 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 DHX34Q14147 1143 aaKnown RBP17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 SMC1AQ14683 1233 aaKnown RBP17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 BNIPLQ7Z465 357 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 JAMLQ86YT9 394 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 DEFB106AQ8N104 65 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 SLC2A13Q96QE2 648 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 TMEM175Q9BSA9 504 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 NGRNQ9NPE2 291 aaKnown RBP17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 SYN3O14994 580 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 KIAA0355O15063 1070 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 HSF2BPO75031 334 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 DGKIO75912 1065 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 UPP2O95045 317 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 EFEMP2O95967 443 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 ALDH2P05091 517 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 HSPA1AP0DMV8 641 aaKnown RBP17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 HSPA1BP0DMV9 641 aaKnown RBP17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 RFC2P35250 354 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 FNTAP49354 379 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 IKBKEQ14164 716 aa17.95■□□□□ 0.46
FRMD4A-202ENST00000342409 TFDP3Q5H9I0 405 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms