RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 H6PDO95479 791 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 INHBAP08476 426 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 SPATA31C1P0DKV0 1188 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 CYP11B1P15538 503 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 EIF2B2P49770 351 aaKnown RBP19.23■□□□□ 0.67
SMPD1-201ENST00000342245 STAT2P52630 851 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 UBE2SQ16763 222 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 KCTD21Q4G0X4 260 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 DCLRE1AQ6PJP8 1040 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 ARCQ7LC44 396 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 PPIL6Q8IXY8 311 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 MYCT1Q8N699 235 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 NLRP7Q8WX94 980 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 SHC3Q92529 594 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 FAM84BQ96KN1 310 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-201ENST00000342245 EYA3Q99504 573 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 PAIP1Q9H074 479 aaKnown RBP19.23■□□□□ 0.67
SMPD1-201ENST00000342245 EMSYQ7Z589 1322 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 SPAG6O75602 509 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 TRPA1O75762 1119 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 FUCA1P04066 466 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 MIER3Q7Z3K6 550 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 CCDC124Q96CT7 223 aaKnown RBP19.23■□□□□ 0.67
SMPD1-201ENST00000342245 SERAC1Q96JX3 654 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 HIPK3Q9H422 1215 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-201ENST00000342245 PLLPQ9Y342 182 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 FARP1Q9Y4F1 1045 aaPredicted RBP19.23■□□□□ 0.67
SMPD1-201ENST00000342245 SCINQ9Y6U3 715 aa19.23■□□□□ 0.67
SMPD1-201ENST00000342245 ITGAVP06756 1048 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 NOVP48745 357 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 CAMK2BQ13554 666 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 FBXO33Q7Z6M2 555 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 SLC47A2Q86VL8 602 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 NUDCD3Q8IVD9 361 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 RCOR2Q8IZ40 523 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 SLC44A1Q8WWI5 657 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 ANKRD36BP1Q96IX9 119 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 TRIM56Q9BRZ2 755 aaKnown RBP19.22■□□□□ 0.67
SMPD1-201ENST00000342245 DHX33Q9H6R0 707 aaKnown RBP19.22■□□□□ 0.67
SMPD1-201ENST00000342245 PARVGQ9HBI0 331 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 PARVBQ9HBI1 364 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 THAP1Q9NVV9 213 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 GID8Q9NWU2 228 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 DNPEPQ9ULA0 475 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 PRPF19Q9UMS4 504 aaKnown RBP19.22■□□□□ 0.67
SMPD1-201ENST00000342245 B3GNT3Q9Y2A9 372 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 SNCAIPQ9Y6H5 919 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 MCF2LO15068 1137 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 NDUFB5O43674 189 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 FBXO21O94952 628 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 BMP3P12645 472 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 PTPN2P17706 415 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 STAT3P40763 770 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 TXNL4AP83876 142 aaKnown RBP19.22■□□□□ 0.67
SMPD1-201ENST00000342245 SPIRE1Q08AE8 756 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 PSMD6Q15008 389 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 LGSNQ5TDP6 509 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 GPR180Q86V85 440 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 DEFB107AQ8IZN7 70 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 HIPK4Q8NE63 616 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 TMEM174Q8WUU8 243 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 SREK1Q8WXA9 508 aaKnown RBP19.22■□□□□ 0.67
SMPD1-201ENST00000342245 DLG3Q92796 817 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 ARHGAP26Q9UNA1 814 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 MYRFQ9Y2G1 1151 aa19.22■□□□□ 0.67
SMPD1-201ENST00000342245 CHI3L2Q15782 390 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 TTC39BQ5VTQ0 682 aaPredicted RBP19.21■□□□□ 0.67
SMPD1-201ENST00000342245 IL23RQ5VWK5 629 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
SMPD1-201ENST00000342245 GPR141Q7Z602 305 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 PPP1R14CQ8TAE6 165 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 THAP11Q96EK4 314 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 NYXQ9GZU5 481 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 STK39Q9UEW8 545 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 PCDHGB4Q9UN71 923 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 PCDHGB5Q9Y5G0 923 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 NHSQ6T4R5 1651 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 COL24A1Q17RW2 1714 aa19.21■□□□□ 0.67
SMPD1-201ENST00000342245 USP17L5A8MUK1 530 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 MEIS1O00470 390 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 ITGAXP20702 1163 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 VAMP7P51809 220 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 SLC5A3P53794 718 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 ACAP1Q15027 740 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 C16orf87Q6PH81 154 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 HPS6Q86YV9 775 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 SEPT12Q8IYM1 358 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 MARCH10Q8NA82 808 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 NKD2Q969F2 451 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 FAM118BQ9BPY3 351 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 TRNAU1APQ9NX07 287 aaKnown RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 RIMS3Q9UJD0 308 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 SLITRK3O94933 977 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 NMT1P30419 496 aaKnown RBP19.2■□□□□ 0.66
SMPD1-201ENST00000342245 L1CAMP32004 1257 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 TTKP33981 857 aa19.2■□□□□ 0.66
SMPD1-201ENST00000342245 NFX1Q12986 1120 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms