RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 HADHQ16836 314 aaKnown RBP22.21■■□□□ 1.15
VRK2-201ENST00000340157 CASKIN2Q8WXE0 1202 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 MAGOHBQ96A72 148 aaKnown RBP22.21■■□□□ 1.15
VRK2-201ENST00000340157 EPB41L5Q9HCM4 733 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.21■■□□□ 1.15
VRK2-201ENST00000340157 MTUS1Q9ULD2 1270 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 LRRD1A4D1F6 860 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 KRT7P08729 469 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 MCM3P25205 808 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 TNFRSF8P28908 595 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 SDC4P31431 198 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CHRNA3P32297 505 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CDKN2BP42772 138 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 PTGIRP43119 386 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 TKTL1P51854 596 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 PPP2R5EQ16537 467 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 FAM172AQ8WUF8 416 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 C1orf54Q8WWF1 131 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 MRPL9Q9BYD2 267 aaKnown RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 LRRC19Q9H756 370 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 LRRC4Q9HBW1 653 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CHST7Q9NS84 486 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CALCOCO1Q9P1Z2 691 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 PCYOX1Q9UHG3 505 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 GALTP07902 379 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CD48P09326 243 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 PTPN7P35236 360 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 PTPN9P43378 593 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CTCFP49711 727 aaPredicted RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 COL4A4P53420 1690 aaPredicted RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 HDAC4P56524 1084 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 TSPY1Q01534 308 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 IKBKEQ14164 716 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 ZFYVE27Q5T4F4 411 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 HFE2Q6ZVN8 426 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CMASQ8NFW8 434 aaPredicted RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 CCDC26Q8TAB7 109 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 BCL7CQ8WUZ0 217 aaPredicted RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 ATG4AQ8WYN0 398 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 CENPIQ92674 756 aaPredicted RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 B3GALT6Q96L58 329 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 TRIM51Q9BSJ1 452 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 DDX23Q9BUQ8 820 aaKnown RBP22.2■■□□□ 1.14
VRK2-201ENST00000340157 ULBP1Q9BZM6 244 aa22.2■■□□□ 1.14
VRK2-201ENST00000340157 PTPRSQ13332 1948 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 hCG_1818297A0A087WSY0 165 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 NT5C1B-RDH14C9J2C7 533 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 SYN3O14994 580 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 TRAPPC3O43617 180 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 UPP2O95045 317 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 ALDH2P05091 517 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 RFC2P35250 354 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 CARSP49589 748 aaKnown RBP22.19■■□□□ 1.14
VRK2-201ENST00000340157 DR1Q01658 176 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 TAZQ16635 292 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 VARS2Q5ST30 1063 aaKnown RBP22.19■■□□□ 1.14
VRK2-201ENST00000340157 BHLHA9Q7RTU4 235 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 UBXN6Q9BZV1 441 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 ZCWPW1Q9H0M4 648 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 NGRNQ9NPE2 291 aaKnown RBP22.19■■□□□ 1.14
VRK2-201ENST00000340157 FAN1Q9Y2M0 1017 aa22.19■■□□□ 1.14
VRK2-201ENST00000340157 HSF2BPO75031 334 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 ERLIN1O75477 346 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 KDELR1P24390 212 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 COILP38432 576 aaPredicted RBP22.18■■□□□ 1.14
VRK2-201ENST00000340157 KCNJ1P48048 391 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 COPS2P61201 443 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 MRPL58Q14197 206 aaKnown RBP22.18■■□□□ 1.14
VRK2-201ENST00000340157 EFHC1Q5JVL4 640 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 FAM171A1Q5VUB5 890 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 OTUD1Q5VV17 481 aaPredicted RBP22.18■■□□□ 1.14
VRK2-201ENST00000340157 CCDC137Q6PK04 289 aaKnown RBP22.18■■□□□ 1.14
VRK2-201ENST00000340157 MAATS1Q7Z4T9 603 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 SIX6OS1Q8N1H7 587 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 LRRC43Q8N309 656 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 AENQ8WTP8 325 aaKnown RBP22.18■■□□□ 1.14
VRK2-201ENST00000340157 SEC14L1Q92503 715 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 TMEM175Q9BSA9 504 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 DCLK3Q9C098 648 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 ALPK3Q96L96 1907 aa22.18■■□□□ 1.14
VRK2-201ENST00000340157 DGKIO75912 1065 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 SASH3O75995 380 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 TIMP1P01033 207 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 FYNP06241 537 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 CSF2RAP15509 400 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 FGFR3P22607 806 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 ATXN1P54253 815 aaKnown RBP22.17■■□□□ 1.14
VRK2-201ENST00000340157 DAOAP59103 153 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 MAPRE1Q15691 268 aaKnown RBP22.17■■□□□ 1.14
VRK2-201ENST00000340157 TFDP3Q5H9I0 405 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 KAZNQ674X7 775 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 NECAB2Q7Z6G3 386 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 JAMLQ86YT9 394 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 IFT20Q8IY31 132 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 DEFB106AQ8N104 65 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 COLEC11Q9BWP8 271 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 FUT8Q9BYC5 575 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.17■■□□□ 1.14
VRK2-201ENST00000340157 KIAA0355O15063 1070 aa22.17■■□□□ 1.14
VRK2-201ENST00000340157 DAB1O75553 588 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms