RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 MYRFLQ96LU7 910 aa18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 DESI2Q9BSY9 194 aa18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 IGFLR1Q9H665 355 aa18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 AVENQ9NQS1 362 aaPredicted RBP18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 SCML2Q9UQR0 700 aa18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 TRANK1O15050 2925 aa18.81■□□□□ 0.6
SDCBP2-201ENST00000339987 FAM170AA1A519 330 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 PIK3R2O00459 728 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 GLP2RO95838 553 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 ZBED1O96006 694 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 HMGA1P17096 107 aaKnown RBP18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 IGFBP4P22692 258 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 YWHAQP27348 245 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 DAOAP59103 153 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 USP46P62068 366 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 RBM10P98175 930 aaKnown RBP18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 ADAM15Q13444 863 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 MTMR3Q13615 1198 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 COL19A1Q14993 1142 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 C2CD6Q53TS8 623 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 OLFML1Q6UWY5 402 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 FAM183BPQ6ZVS7 135 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 DNAJB7Q7Z6W7 309 aaPredicted RBP18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 SCUBE3Q8IX30 993 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 TXLNBQ8N3L3 684 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 C3orf20Q8ND61 904 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 CTNNBL1Q8WYA6 563 aaPredicted RBP18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 ZNF653Q96CK0 615 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 PACSIN1Q9BY11 444 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 SFXN1Q9H9B4 322 aa18.8■□□□□ 0.6
SDCBP2-201ENST00000339987 PRRC2BQ5JSZ5 2229 aaKnown RBP18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 TCRBV5S1A1TA0A578 114 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 XYLBO75191 536 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 RFPL2O75678 378 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 CYP1A2P05177 515 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 ABCB4P21439 1286 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 RRM1P23921 792 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 VAV2P52735 878 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 GPC5P78333 572 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 MRPS5P82675 430 aaKnown RBP18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 SLC6A3Q01959 620 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 TAF12Q16514 161 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 OR6B2Q6IFH4 312 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 PLEKHA7Q6IQ23 1121 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 Q7L0L9 218 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 STKLD1Q8NE28 680 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 ZNF512Q96ME7 567 aaPredicted RBP18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 PRKD2Q9BZL6 878 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 THAP2Q9H0W7 228 aa18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 UXTQ9UBK9 157 aaPredicted RBP18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 CNOT8Q9UFF9 292 aaKnown RBP18.79■□□□□ 0.6
SDCBP2-201ENST00000339987 CCL16O15467 120 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 GLI1P08151 1106 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 CCDC175P0C221 793 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 USP17L7P0C7H9 530 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 CTC1Q2NKJ3 1217 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 BHLHA9Q7RTU4 235 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 CLEC4CQ8WTT0 213 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 OVCA2Q8WZ82 227 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 FBXO32Q969P5 355 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 ZNF707Q96C28 371 aaPredicted RBP18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 CDX2Q99626 313 aaPredicted RBP18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 ASNSD1Q9NWL6 643 aa18.78■□□□□ 0.6
SDCBP2-201ENST00000339987 ZNF638Q14966 1978 aaKnown RBP18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 SPDYE4A6NLX3 237 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 LINC01565O15544 149 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 PJA2O43164 708 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 HOXB8P17481 243 aaPredicted RBP18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 IFRD2Q12894 506 aaPredicted RBP18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 TAF10Q12962 218 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 EFHC1Q5JVL4 640 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 FAM102AQ5T9C2 384 aaPredicted RBP18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 ANKRD54Q6NXT1 300 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 DNAJC24Q6P3W2 148 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 SLC26A9Q7LBE3 791 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 KIAA1328Q86T90 577 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 MON1AQ86VX9 555 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 PDZD8Q8NEN9 1154 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 MYLIPQ8WY64 445 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 ARHGEF26Q96DR7 871 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 TRIM44Q96DX7 344 aaPredicted RBP18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 GUCD1Q96NT3 240 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 SLITRK1Q96PX8 696 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 LRRC3Q9BY71 257 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 PARVAQ9NVD7 372 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 MAGED2Q9UNF1 606 aaPredicted RBP18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 SCINQ9Y6U3 715 aa18.77■□□□□ 0.6
SDCBP2-201ENST00000339987 MYO16Q9Y6X6 1858 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 CCDC195A0A1B0GUA6 201 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 RCCD1A6NED2 376 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 SIGLEC16A6NMB1 481 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 YJEFN3A6XGL0 299 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 E7ENQ6 273 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 GOLGA8SH3BPF8 625 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 ATMINO43313 823 aaPredicted RBP18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 ZDHHC11BP0C7U3 371 aa18.76■□□□□ 0.59
SDCBP2-201ENST00000339987 PPP3CCP48454 512 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms