RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 IL17RCQ8NAC3 791 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 TXNDC5Q8NBS9 432 aaKnown RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 CCDC127Q96BQ5 260 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 PNKPQ96T60 521 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 CUEDC2Q9H467 287 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 DPEP3Q9H4B8 488 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 ZSCAN16Q9H4T2 348 aaPredicted RBP16.63■□□□□ 0.25
LINC01116-202ENST00000339037 TMEM9BQ9NQ34 198 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 TMEM30AQ9NV96 361 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
LINC01116-202ENST00000339037 PTPRDP23468 1912 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 PATE3B3GLJ2 98 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 GIPC1O14908 333 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 KAT7O95251 611 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 APODP05090 189 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 FAM163BP0C2L3 166 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 MBL2P11226 248 aaPredicted RBP16.62■□□□□ 0.25
LINC01116-202ENST00000339037 ADH5P11766 374 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 SLC6A11P48066 632 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
LINC01116-202ENST00000339037 CYP2J2P51589 502 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 AMPD3Q01432 767 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 CYP24A1Q07973 514 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 MESP2Q0VG99 397 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 PSMD6Q15008 389 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 STK38Q15208 465 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 HSF5Q4G112 596 aaPredicted RBP16.62■□□□□ 0.25
LINC01116-202ENST00000339037 FAM26FQ5R3K3 315 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 SH3PXD2AQ5TCZ1 1133 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 EPM2AIP1Q7L775 607 aaPredicted RBP16.62■□□□□ 0.25
LINC01116-202ENST00000339037 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 B3GALNT2Q8NCR0 500 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 WHAMMQ8TF30 809 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 SPACA7Q96KW9 195 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 CGRRF1Q99675 332 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 ARHGEF4Q9NR80 690 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 TBC1D14Q9P2M4 693 aa16.62■□□□□ 0.25
LINC01116-202ENST00000339037 GON4LQ3T8J9 2241 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 A8MXQ7 604 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.61■□□□□ 0.25
LINC01116-202ENST00000339037 SGK1O00141 431 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 TGFB1I1O43294 461 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 KLF8O95600 359 aaPredicted RBP16.61■□□□□ 0.25
LINC01116-202ENST00000339037 HNRNPLP14866 589 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC01116-202ENST00000339037 YWHAQP27348 245 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 GRIA2P42262 883 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 KDSRQ06136 332 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 TRPC3Q13507 836 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 RHBDF2Q6PJF5 856 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 LPCAT2Q7L5N7 544 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 NUP93Q8N1F7 819 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 XXYLT1Q8NBI6 393 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 PDZD8Q8NEN9 1154 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 OLIG1Q8TAK6 271 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 ZNF507Q8TCN5 953 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 RLN3Q8WXF3 142 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 PIGKQ92643 395 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 DHX58Q96C10 678 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 POLMQ9NP87 494 aaPredicted RBP16.61■□□□□ 0.25
LINC01116-202ENST00000339037 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
LINC01116-202ENST00000339037 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
LINC01116-202ENST00000339037 NUP205Q92621 2012 aa16.61■□□□□ 0.25
LINC01116-202ENST00000339037 E2F8A0AVK6 867 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 CLDN5O00501 218 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 CDX4O14627 284 aaPredicted RBP16.6■□□□□ 0.25
LINC01116-202ENST00000339037 CLIC2O15247 247 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 RTN3O95197 1032 aaPredicted RBP16.6■□□□□ 0.25
LINC01116-202ENST00000339037 STAU1O95793 577 aaKnown RBP16.6■□□□□ 0.25
LINC01116-202ENST00000339037 PROS1P07225 676 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 P2RY2P41231 377 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 KIR2DL1P43626 348 aaPredicted RBP16.6■□□□□ 0.25
LINC01116-202ENST00000339037 SNRPFP62306 86 aaKnown RBP16.6■□□□□ 0.25
LINC01116-202ENST00000339037 EOGTQ5NDL2 527 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 LY6G5CQ5SRR4 150 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 NELFCDQ8IXH7 590 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 IQUBQ8NA54 791 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 LINC00301Q8NCQ3 95 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 SCFD1Q8WVM8 642 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 HMGB4Q8WW32 186 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 OVCA2Q8WZ82 227 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 FBXO32Q969P5 355 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 SNX21Q969T3 373 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 B3GNT5Q9BYG0 378 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 UBE4BO95155 1302 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 THADAQ6YHU6 1953 aa16.6■□□□□ 0.25
LINC01116-202ENST00000339037 CACNA1EQ15878 2313 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 ATRXP46100 2492 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 PKD1L2Q7Z442 2459 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 A0A0A0MRY4 1105 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 TNFRSF10BO14763 440 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 SPTLC2O15270 562 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 COCHO43405 550 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 CLSTN1O94985 981 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 CEACAM1P13688 526 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 CSRP1P21291 193 aaKnown RBP16.59■□□□□ 0.25
LINC01116-202ENST00000339037 ATICP31939 592 aa16.59■□□□□ 0.25
LINC01116-202ENST00000339037 TNFRSF4P43489 277 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms