RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 IVNS1ABPQ9Y6Y0 642 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 PRR5-ARHGAP8B1AHC4 643 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 COQ9O75208 318 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 MAGEA8P43361 318 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 NOMO3P69849 1222 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 ARHGAP8P85298 464 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 XIAPP98170 497 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 PDK3Q15120 406 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 POMGNT1Q8WZA1 660 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 AFG3L2Q9Y4W6 797 aa18.86■□□□□ 0.61
CLSTN3-202ENST00000331148 DDX39AO00148 427 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 GTF2H1P32780 548 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 EPHX2P34913 555 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 CPOXP36551 454 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 CHN2P52757 468 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 ALDH18A1P54886 795 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 BPIFB4P59827 614 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 BST1Q10588 318 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 HIC1Q14526 733 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SLC35B2Q8TB61 432 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 FEZF2Q8TBJ5 459 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 GDPD5Q8WTR4 605 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 DGCR14Q96DF8 476 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 FAM84AQ96KN4 292 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 ACAP3Q96P50 834 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SRPK1Q96SB4 655 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SENP7Q9BQF6 1050 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 MECRQ9BV79 373 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 IP6K2Q9UHH9 426 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 ADAMTS6Q9UKP5 1117 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 VWA5AO00534 786 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 PFDN1O60925 122 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SMIM18P0DKX4 95 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 TSHRP16473 764 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 PEX2P28328 305 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SSTR3P32745 418 aaPredicted RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 PTPN7P35236 360 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 HSD17B4P51659 736 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 PEX3P56589 373 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 HPCAP84074 193 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 MMEL1Q495T6 779 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 CDHR3Q6ZTQ4 885 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 ZC3H15Q8WU90 426 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SLC44A1Q8WWI5 657 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 CLEC4DQ8WXI8 215 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 LZICQ8WZA0 190 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 ACSF2Q96CM8 615 aaPredicted RBP18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 RHBDL2Q9NX52 303 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 SOX13Q9UN79 622 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 IKBKGQ9Y6K9 419 aa18.85■□□□□ 0.61
CLSTN3-202ENST00000331148 TCRBV7S3A2A0A539 114 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 GLTPD2A6NH11 291 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TMEM63AO94886 807 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 RARRES1P49788 294 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 AQP5P55064 265 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 GDF10P55107 478 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 NCKAP1LP55160 1127 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TMPRSS15P98073 1019 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 CYP24A1Q07973 514 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 VGLL4Q14135 290 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 ANKRD20A4Q4UJ75 823 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TMEM259Q4ZIN3 620 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 ACBD5Q5T8D3 534 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 CES4AQ5XG92 561 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 UGT2A3Q6UWM9 527 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 PHF13Q86YI8 300 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TAB3Q8N5C8 712 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 VCPIP1Q96JH7 1222 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 DNAJC1Q96KC8 554 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 MFSD14AQ96MC6 490 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 IQCGQ9H095 443 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 CHMP2BQ9UQN3 213 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 hCG_2014768A0A024R1R8 64 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 COPEO14579 308 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 AP1G1O43747 822 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 ZC3H11AO75152 810 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 PGM3O95394 542 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 INHBAP08476 426 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 CCDC166P0CW27 439 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 SETSIPP0DME0 302 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 RPL26P61254 145 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 RPL7AP62424 266 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 UBAP2LQ14157 1087 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TFDP3Q5H9I0 405 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TRIM72Q6ZMU5 477 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 TRIM42Q8IWZ5 723 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 PIP4K2CQ8TBX8 421 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 ATG4CQ96DT6 458 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 PRICKLE1Q96MT3 831 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 C10orf88Q9H8K7 445 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 GPRC5CQ9NQ84 441 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 MARCOQ9UEW3 520 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 CSADQ9Y600 493 aa18.84■□□□□ 0.61
CLSTN3-202ENST00000331148 LOXHD1Q8IVV2 1947 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 C15orf38-AP3S2A0A0A6YYH1 394 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 ARHGAP42A6NI28 874 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 TTC36A6NLP5 189 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms