RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 APOFQ13790 326 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 HSP90AA5PQ58FG0 334 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 BORAQ6PGQ7 559 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 DENND5BQ6ZUT9 1274 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 NUDCD3Q8IVD9 361 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 TTC13Q8NBP0 860 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 CEP70Q8NHQ1 597 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF696Q9H7X3 374 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 PARVAQ9NVD7 372 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 SH3GLB1Q9Y371 365 aa13.3□□□□□ -0.28
CCDC60-201ENST00000327554 F8VP50 259 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 PROCP04070 461 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ATP6V1B1P15313 513 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 VARSP26640 1264 aaKnown RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 L1CAMP32004 1257 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 OGDHQ02218 1023 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 CYP24A1Q07973 514 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 USP41Q3LFD5 358 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 CEP55Q53EZ4 464 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 TTC39BQ5VTQ0 682 aaPredicted RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 KLHL35Q6PF15 583 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ANO5Q75V66 913 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 AHI1Q8N157 1196 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ACTL9Q8TC94 416 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 NLRP4Q96MN2 994 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF778Q96MU6 729 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 PHF12Q96QT6 1004 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 TEKT3Q9BXF9 490 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 C3orf70A6NLC5 250 aaPredicted RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ZC3H11AO75152 810 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 TRMUO75648 421 aaKnown RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 RFPL1O75677 317 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 WEE2P0C1S8 567 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ACO1P21399 889 aaKnown RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 RARRES1P49788 294 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 COPAP53621 1224 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 PEX3P56589 373 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 IKQ13123 557 aaPredicted RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 GK3PQ14409 553 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 TCHHL1Q5QJ38 904 aaPredicted RBP13.29□□□□□ -0.28
CCDC60-201ENST00000327554 CC2D2BQ6DHV5 1058 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 SLC26A11Q86WA9 606 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 HPS6Q86YV9 775 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 CCDC33Q8N5R6 958 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 FBXL18Q96ME1 805 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 GPRC5CQ9NQ84 441 aa13.29□□□□□ -0.28
CCDC60-201ENST00000327554 MYOCOSA0A1B0GUC4 107 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CRTAMO95727 393 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 NDUFB10O96000 172 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CFBP00751 764 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CLCN2P51788 898 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ZYXQ15942 572 aaKnown RBP13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
CCDC60-201ENST00000327554 PAOXQ6QHF9 649 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 TSHZ1Q6ZSZ6 1077 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 TRIM67Q6ZTA4 783 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ANKRD23Q86SG2 305 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 UNC45BQ8IWX7 931 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 RAB3IL1Q8TBN0 382 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 HSPBAP1Q96EW2 488 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CYP4F11Q9HBI6 524 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 MKS1Q9NXB0 559 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ARHGAP10A1A4S6 786 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 DDX39AO00148 427 aaKnown RBP13.28□□□□□ -0.28
CCDC60-201ENST00000327554 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 BPGMP07738 259 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 SNRPAP09012 282 aaKnown RBP13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ITGAXP20702 1163 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CD97P48960 835 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 YWHAGP61981 247 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC60-201ENST00000327554 DYNLT1P63172 113 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CREB5Q02930 508 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 SLC39A4Q6P5W5 647 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 C15orf39Q6ZRI6 1047 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ZCCHC23Q6ZST2 131 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ZFPM1Q8IX07 1006 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 PQLC1Q8N2U9 271 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 RIN3Q8TB24 985 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 MRPL1Q9BYD6 325 aaKnown RBP13.28□□□□□ -0.28
CCDC60-201ENST00000327554 RAB26Q9ULW5 256 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 TTLL3Q9Y4R7 772 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 CEPT1Q9Y6K0 416 aa13.28□□□□□ -0.28
CCDC60-201ENST00000327554 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
CCDC60-201ENST00000327554 CXorf49A8MYA2 514 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 H3BSA7 217 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms