RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 SLC15A4Q8N697 577 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 MAFAQ8NHW3 353 aaPredicted RBP3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 CTHRC1Q96CG8 243 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 HSPBAP1Q96EW2 488 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 MVB12AQ96EY5 273 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 CDK5RAP3Q96JB5 506 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 ZFYVE19Q96K21 471 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 P2RX7Q99572 595 aaKnown RBP3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 SMAD5Q99717 465 aaKnown RBP3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 ARMT1Q9H993 441 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 GBA2Q9HCG7 927 aaPredicted RBP3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 TCF7L1Q9HCS4 588 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 ZBTB40Q9NUA8 1239 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 HS3ST3B1Q9Y662 390 aa3.82□□□□□ -1.8
CBX3P1-201ENST00000325243 A0A087WWL8 130 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 MYO1CO00159 1063 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 THP07101 528 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 VCAM1P19320 739 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 TNFRSF1BP20333 461 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 CDKN2AP42771 156 aaKnown RBP3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 YPEL5P62699 121 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 NPY5RQ15761 445 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 C4orf46Q504U0 113 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 PLA1AQ53H76 456 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 ANO7Q6IWH7 933 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 ZNF549Q6P9A3 640 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 RANBP10Q6VN20 620 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 PPP2R3CQ969Q6 453 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 NUP88Q99567 741 aaPredicted RBP3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 TRMOQ9BU70 441 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 ZNF112Q9UJU3 913 aa3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 DRG1Q9Y295 367 aaKnown RBP3.81□□□□□ -1.8
CBX3P1-201ENST00000325243 PRSS44E7EML9 344 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 PSMD9O00233 223 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 TULP3O75386 442 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 IL33O95760 270 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 XRCC6P12956 609 aaKnown RBP eCLIP3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 PHKG2P15735 406 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 RPS13P62277 151 aaKnown RBP3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 RHDQ02161 417 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 CERCAMQ5T4B2 595 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 WIPF2Q8TF74 440 aaPredicted RBP3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 HPS3Q969F9 1004 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 MTFMTQ96DP5 389 aaKnown RBP3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 THOC3Q96J01 351 aaKnown RBP3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 STAP2Q9UGK3 403 aa3.8□□□□□ -1.8
CBX3P1-201ENST00000325243 SPRY2O43597 315 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 FGF2P09038 288 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 ARFIP2P53365 341 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 BCAT1P54687 386 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 MTX1Q13505 466 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 ZNF585BQ52M93 769 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 ATAT1Q5SQI0 421 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 DAB2IPQ5VWQ8 1189 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 LVRNQ6Q4G3 990 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 Q6ZTC4 211 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 RAPGEF4Q8WZA2 1011 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 CHMP4CQ96CF2 233 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 WDYHV1Q96HA8 205 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 CGRRF1Q99675 332 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 MS4A7Q9GZW8 240 aaPredicted RBP3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 VPS33BQ9H267 617 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 MLXIPQ9HAP2 919 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 GAR1Q9NY12 217 aaKnown RBP3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 STXBP5LQ9Y2K9 1186 aa3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 LUC7L2Q9Y383 392 aaKnown RBP3.79□□□□□ -1.8
CBX3P1-201ENST00000325243 C4orf47A7E2U8 309 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 TMEM233B4DJY2 109 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 HYAL1Q12794 435 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 CTBP1Q13363 440 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 CCNIQ14094 377 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 KCNB1Q14721 858 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 LMBRD2Q68DH5 695 aaPredicted RBP3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 USP43Q70EL4 1123 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 MMP21Q8N119 569 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 DNAJB14Q8TBM8 379 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 C1GALT1C1Q96EU7 318 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 HS6ST2Q96MM7 605 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 MAP3K14Q99558 947 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 TRIM54Q9BYV2 358 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 SNX15Q9NRS6 342 aa3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 TCF20Q9UGU0 1960 aaKnown RBP3.78□□□□□ -1.8
CBX3P1-201ENST00000325243 A0A088AWK7 358 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 M0R3H8 397 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 T-ENOLP0DO92 83 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 NPR1P16066 1061 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 CREB1P16220 341 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 RAB1AP62820 205 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 SLC14A1Q13336 389 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 SLC9C1Q4G0N8 1177 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 ZBTB46Q86UZ6 589 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 RAB11FIP4Q86YS3 637 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 ADHFE1Q8IWW8 467 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 SPARTQ8N0X7 666 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 MPLKIPQ8TAP9 179 aa3.77□□□□□ -1.81
CBX3P1-201ENST00000325243 VN1R3Q9BXE9 311 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms