RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 UNGP13051 313 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 UBAP2Q5T6F2 1119 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 ZCCHC23Q6ZST2 131 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 BBS12Q6ZW61 710 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 KLHL4Q9C0H6 718 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 UPF3AQ9H1J1 476 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 CACNA1SQ13698 1873 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 MMP8P22894 467 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 GALNTL6Q49A17 601 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 C10orf82Q8WW14 230 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 APBB2Q92870 758 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 TRPV6Q9H1D0 765 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 MIPP30301 263 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 KPNA2P52292 529 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 TCEAL1Q15170 157 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 CYTH1Q15438 398 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 ATF7IP2Q5U623 682 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 C7orf43Q8WVR3 580 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 JADE3Q92613 823 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 NKD2Q969F2 451 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 AAASQ9NRG9 546 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 THAP1Q9NVV9 213 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 PMM2O15305 246 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 KCTD2Q14681 263 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 P2RX7Q99572 595 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 CADM1Q9BY67 442 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 GIPC1O14908 333 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 FASTKD1Q53R41 847 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 RIPOR1Q6ZS17 1223 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 SH3BP5LQ7L8J4 393 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 PRPF31Q8WWY3 499 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 RXFP2Q8WXD0 754 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 SEPT1Q8WYJ6 367 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 DDX50Q9BQ39 737 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 CSADQ9Y600 493 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 TSHRP16473 764 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 ADSSP30520 456 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 RNF220Q5VTB9 566 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 IER5Q5VY09 327 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 DSTYKQ6XUX3 929 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 ALYREFQ86V81 257 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 DEFB107AQ8IZN7 70 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 OR5B17Q8NGF7 314 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 PLEKHO2Q8TD55 490 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 HAUS8Q9BT25 410 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 NMUR2Q9GZQ4 415 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 GTSE1Q9NYZ3 720 aa13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
DNMT3A-202ENST00000321117 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 CETPP11597 493 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 PTPN11Q06124 597 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 LBRQ14739 615 aaKnown RBP13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 PDK2Q15119 407 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 GSTA3Q16772 222 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 NET1Q7Z628 596 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 GALNT4Q8N4A0 578 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 ATP9BO43861 1147 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 ITGB3P05106 788 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 ANPEPP15144 967 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 SPRP35270 261 aaPredicted RBP13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 C16orf89Q6UX73 402 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 NT5C1AQ9BXI3 368 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 ETAA1Q9NY74 926 aa13.21□□□□□ -0.29
DNMT3A-202ENST00000321117 PDE5AO76074 875 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 IL18RAPO95256 599 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 APOEP02649 317 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 CYP1A1P04798 512 aaPredicted RBP13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 POLD1P28340 1107 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 NUDT2P50583 147 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 FKBP1AP62942 108 aaKnown RBP13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 FLOT2Q14254 428 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 STILQ15468 1287 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 RFWD3Q6PCD5 774 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 ADGRD1Q6QNK2 874 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 UNC45BQ8IWX7 931 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 ZDHHC14Q8IZN3 488 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 STKLD1Q8NE28 680 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 VPS33BQ9H267 617 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 DCDC2Q9UHG0 476 aa13.21□□□□□ -0.3
DNMT3A-202ENST00000321117 MYPNQ86TC9 1320 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms