RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 HEATR9A2RTY3 570 aa9.14□□□□□ -0.95
SSBP2-201ENST00000320672 AP3B1O00203 1094 aa9.14□□□□□ -0.95
SSBP2-201ENST00000320672 NPM3O75607 178 aaKnown RBP9.14□□□□□ -0.95
SSBP2-201ENST00000320672 ALDH7A1P49419 539 aaKnown RBP9.14□□□□□ -0.95
SSBP2-201ENST00000320672 ZNF177Q13360 481 aaPredicted RBP9.14□□□□□ -0.95
SSBP2-201ENST00000320672 PLCL1Q15111 1095 aa9.14□□□□□ -0.95
SSBP2-201ENST00000320672 ZNF555Q8NEP9 628 aa9.14□□□□□ -0.95
SSBP2-201ENST00000320672 NDRG1Q92597 394 aaKnown RBP9.14□□□□□ -0.95
SSBP2-201ENST00000320672 KAZALD1Q96I82 304 aa9.14□□□□□ -0.95
SSBP2-201ENST00000320672 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.14□□□□□ -0.952e-6■■■■■ 42.2
SSBP2-201ENST00000320672 H2AFY2Q9P0M6 372 aaPredicted RBP9.14□□□□□ -0.95
SSBP2-201ENST00000320672 CRYL1Q9Y2S2 319 aa9.14□□□□□ -0.95
SSBP2-201ENST00000320672 LAMC2Q13753 1193 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 DGKDQ16760 1214 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TTC39BQ5VTQ0 682 aaPredicted RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ANKS3Q6ZW76 656 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 STRA8Q7Z7C7 330 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 SLC13A5Q86YT5 568 aaPredicted RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 COLGALT1Q8NBJ5 622 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 FAM151AQ8WW52 585 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 PLEKHA8Q96JA3 519 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 EXOC2Q96KP1 924 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 BPIFA3Q9BQP9 254 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ERP44Q9BS26 406 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 NDOR1Q9UHB4 597 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 H0YC42 278 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TBX3O15119 743 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 RASSF9O75901 435 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 CHI3L1P36222 383 aaPredicted RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 PCYT1AP49585 367 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 KCNB1Q14721 858 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ACAP1Q15027 740 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 PTGISQ16647 500 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 C15orf59Q2T9L4 293 aaPredicted RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TDRD10Q5VZ19 366 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ARHGAP17Q68EM7 881 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 FBXO33Q7Z6M2 555 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MICU2Q8IYU8 434 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TPD52L3Q96J77 140 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TMEM8AQ9HCN3 771 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 VPS28Q9UK41 221 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 RNF103O00237 685 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MAN1A2O60476 641 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 CCDC22O60826 627 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 SNRPAP09012 282 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TCEA1P23193 301 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MGAT1P26572 445 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MED21Q13503 144 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 BOP1Q14137 746 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 RARS2Q5T160 578 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 NIF3L1Q9GZT8 377 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MROH8Q9H579 483 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TRPC4Q9UBN4 977 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ATP6V1HQ9UI12 483 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TTC37Q6PGP7 1564 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 EML1O00423 815 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 STKLD1Q8NE28 680 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 C7orf57Q8NEG2 295 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 OLFML3Q9NRN5 406 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 INTS13Q9NVM9 706 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 A0A1W2PQC6 194 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ITIH2P19823 946 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 FUT4P22083 530 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TAF6P49848 677 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TKTL1P51854 596 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 PKNOX1P55347 436 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 NFIL3Q16649 462 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ZNF697Q5TEC3 545 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 TMC7Q7Z402 723 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 ADGRF2Q8IZF7 708 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 DCUN1D5Q9BTE7 237 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 CCSER1Q9C0I3 900 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 SCUBE2Q9NQ36 999 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 NYAP2Q9P242 653 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 HERC5Q9UII4 1024 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 PYGLP06737 847 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 CSNK2BP67870 215 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 DENND1BQ6P3S1 775 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 FIG4Q92562 907 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MED15Q96RN5 788 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 RASSF10A6NK89 507 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 PHGDHO43175 533 aaKnown RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 MSX2P35548 267 aaPredicted RBP9.13□□□□□ -0.95
SSBP2-201ENST00000320672 SV2CQ496J9 727 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 RIPOR1Q6ZS17 1223 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 CARD9Q9H257 536 aa9.13□□□□□ -0.95
SSBP2-201ENST00000320672 STRNO43815 780 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 SLC2A4P14672 509 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 ALOX15P16050 662 aaPredicted RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PRKAG1P54619 331 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 NFYCQ13952 458 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 PDIA5Q14554 519 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 ANKRD49Q8WVL7 239 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TMEM120AQ9BXJ8 343 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 SLC27A5Q9Y2P5 690 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 KDM5AP29375 1690 aaKnown RBP9.12□□□□□ -0.95
SSBP2-201ENST00000320672 AGTP01019 485 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 TRIM65Q6PJ69 517 aa9.12□□□□□ -0.95
SSBP2-201ENST00000320672 MAP3K14Q99558 947 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms