RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 GEMIN4P57678 1058 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 LOXL3P58215 753 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 SP2Q02086 613 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 PIGFQ07326 219 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ZNF844Q08AG5 666 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 GRM4Q14833 912 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 SURF1Q15526 300 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 INSCQ1MX18 579 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 CD300EQ496F6 205 aaPredicted RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ARHGAP40Q5TG30 622 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 RRAGAQ7L523 313 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 TMPRSS9Q7Z410 1059 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 PLEKHH3Q7Z736 793 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 LRRTM4Q86VH4 590 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 C2CD5Q86YS7 1000 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 RHOT2Q8IXI1 618 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 FTSJ3Q8IY81 847 aaKnown RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 PPP2R3CQ969Q6 453 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ZBTB45Q96K62 511 aaPredicted RBP4.64□□□□□ -1.67
SMCO3-201ENST00000316048 SLC38A3Q99624 504 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 PRDM8Q9NQV8 689 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 SHOC2Q9UQ13 582 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 ABCA6Q8N139 1617 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 KIF1BO60333 1816 aa4.64□□□□□ -1.67
SMCO3-201ENST00000316048 EIF3AQ14152 1382 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 RICTORQ6R327 1708 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FRMPD1Q5SYB0 1578 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 DIP2CQ9Y2E4 1556 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ADM5C9JUS6 153 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 J3KRW8 73 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 INMTO95050 263 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 CYP2C9P11712 490 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 IDEP14735 1019 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 BDNFP23560 247 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 AKT1P31749 480 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 TUBP50607 506 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 PRKAG1P54619 331 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 NSUN2Q08J23 767 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 G3BP1Q13283 466 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FHL3Q13643 280 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 CNGB1Q14028 1251 aaPredicted RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 MAPRE1Q15691 268 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 PDCD4Q53EL6 469 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 WDR78Q5VTH9 848 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ARL6IP4Q66PJ3 421 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 SLFN13Q68D06 897 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ABLIM2Q6H8Q1 611 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 RGS7BPQ6MZT1 257 aaPredicted RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 MRNIPQ6NTE8 343 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 LAYNQ6UX15 382 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 MAATS1Q7Z4T9 603 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ZNF808Q8N4W9 903 aaPredicted RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 Q8NA96 180 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FEZF2Q8TBJ5 459 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 EID2BQ96D98 161 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 PNKPQ96T60 521 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ZSCAN32Q9NX65 697 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 NDRG4Q9ULP0 352 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 DAPP1Q9UN19 280 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ZFR2Q9UPR6 939 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 NPATQ14207 1427 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ARHGAP31Q2M1Z3 1444 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 PPRC1Q5VV67 1664 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 J3KTA2 159 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 RGS10O43665 173 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 COQ9O75208 318 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 RAD17O75943 681 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 SRGAP2BP0DMP2 458 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 XRCC6P12956 609 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FOXD4Q12950 439 aaPredicted RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 GPS1Q13098 491 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FAM110CQ1W6H9 321 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FBXO47Q5MNV8 452 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 MZT2AQ6P582 158 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 LRRC55Q6ZSA7 311 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 LIMS2Q7Z4I7 341 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 HERC6Q8IVU3 1022 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 TMEM151BQ8IW70 566 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ESX1Q8N693 406 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 USP13Q92995 863 aaPredicted RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 TESK2Q96S53 571 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 GPR20Q99678 358 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 RTKNQ9BST9 563 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 KIF17Q9P2E2 1029 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 HERC5Q9UII4 1024 aaKnown RBP4.63□□□□□ -1.67
SMCO3-201ENST00000316048 SERTAD3Q9UJW9 196 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 SLC30A1Q9Y6M5 507 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 ABCC3O15438 1527 aa4.63□□□□□ -1.67
SMCO3-201ENST00000316048 FER1L4A9Z1Z3 1794 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 YEATS2Q9ULM3 1422 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 MYOM2P54296 1465 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 SCAF11Q99590 1463 aaKnown RBP4.62□□□□□ -1.67
SMCO3-201ENST00000316048 ZMYM4Q5VZL5 1548 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 AQP7P3A6NL99 342 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 CAPN14A8MX76 684 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 GPR42O15529 346 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 EPB41L2O43491 1005 aaKnown RBP4.62□□□□□ -1.67
SMCO3-201ENST00000316048 FAM155BO75949 473 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 VNN1O95497 513 aa4.62□□□□□ -1.67
SMCO3-201ENST00000316048 PDHA1P08559 390 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms