RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CPB1P15086 417 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 CYP2F1P24903 491 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 SMC1AQ14683 1233 aaKnown RBP18.36■□□□□ 0.53
KRT28-201ENST00000306658 PPP2R5EQ16537 467 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 KIAA1841Q6NSI8 718 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 AADACL2Q6P093 401 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 TAS1R1Q7RTX1 841 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 CCDC50Q8IVM0 306 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 MAIP1Q8WWC4 291 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 TMEM169Q96HH4 297 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 DDX23Q9BUQ8 820 aaKnown RBP18.36■□□□□ 0.53
KRT28-201ENST00000306658 AP1M1Q9BXS5 423 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 ULBP1Q9BZM6 244 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 MTUS1Q9ULD2 1270 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 USP18Q9UMW8 372 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 ALPK3Q96L96 1907 aa18.36■□□□□ 0.53
KRT28-201ENST00000306658 NLRC5Q86WI3 1866 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 TBC1D4O60343 1298 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 RHOXF2BP0C7M4 288 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 TCF4P15884 667 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 MIPP30301 263 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 MATKP42679 507 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 DAOAP59103 153 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 ATP11AP98196 1134 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 SLC25A11Q02978 314 aaKnown RBP18.35■□□□□ 0.53
KRT28-201ENST00000306658 GPR17Q13304 367 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 CDO1Q16878 200 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 C15orf59Q2T9L4 293 aaPredicted RBP18.35■□□□□ 0.53
KRT28-201ENST00000306658 GLE1Q53GS7 698 aaKnown RBP18.35■□□□□ 0.53
KRT28-201ENST00000306658 GPRIN1Q7Z2K8 1008 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 SLC13A5Q86YT5 568 aaPredicted RBP18.35■□□□□ 0.53
KRT28-201ENST00000306658 SLC39A11Q8N1S5 342 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 SCML4Q8N228 414 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 IRGQQ8WZA9 623 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 RHOXF2Q9BQY4 288 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 HTATIP2Q9BUP3 242 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 POPDC2Q9HBU9 364 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 AAASQ9NRG9 546 aa18.35■□□□□ 0.53
KRT28-201ENST00000306658 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
KRT28-201ENST00000306658 TRIM66O15016 1216 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 PRPSAP2O60256 369 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 DAB1O75553 588 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 GJB5O95377 273 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 KRT1P04264 644 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 TUBBP07437 444 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 NOS2P35228 1153 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 MAGEA11P43364 429 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 RABGGTBP53611 331 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 ARPP19P56211 112 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 COPS2P61201 443 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 PM20D1Q6GTS8 502 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 RNF168Q8IYW5 571 aaPredicted RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 COLGALT1Q8NBJ5 622 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 C2orf15Q8WU43 125 aaKnown RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 FAM172AQ8WUF8 416 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 ZBED2Q9BTP6 218 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 ZWILCHQ9H900 591 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 CHST7Q9NS84 486 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 SPG21Q9NZD8 308 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 PCSK1NQ9UHG2 260 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 FSCN2O14926 492 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 SOD2P04179 222 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 USP17L7P0C7H9 530 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 PPM1AP35813 382 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 ATP13A4Q4VNC1 1196 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 TMEM240Q5SV17 173 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 SH3PXD2AQ5TCZ1 1133 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 C8orf74Q6P047 294 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 SCN4BQ8IWT1 228 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 DEFB106AQ8N104 65 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 SPPL2BQ8TCT7 592 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 RIN2Q8WYP3 895 aaPredicted RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 PIK3R5Q8WYR1 880 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 NDRG1Q92597 394 aaKnown RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 CENPIQ92674 756 aaPredicted RBP18.34■□□□□ 0.53
KRT28-201ENST00000306658 C8orf48Q96LL4 319 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 KRT12Q99456 494 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 STAP1Q9ULZ2 295 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 BACE2Q9Y5Z0 518 aa18.34■□□□□ 0.53
KRT28-201ENST00000306658 CAPN9O14815 690 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 IL1R2P27930 398 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 PSMD5Q16401 504 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 SLC25A52Q3SY17 297 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 BOLA3Q53S33 107 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 DCAF6Q58WW2 860 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 TXNRD3NBQ6F5E7 133 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.52
KRT28-201ENST00000306658 STRADAQ7RTN6 431 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 ADAT2Q7Z6V5 191 aaKnown RBP18.33■□□□□ 0.52
KRT28-201ENST00000306658 KLHL7Q8IXQ5 586 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 FBXO22Q8NEZ5 403 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 RNF25Q96BH1 459 aaPredicted RBP18.33■□□□□ 0.52
KRT28-201ENST00000306658 PGLYRP2Q96PD5 576 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 SLC2A13Q96QE2 648 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 TBCBQ99426 244 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.52
KRT28-201ENST00000306658 TRIM62Q9BVG3 475 aa18.33■□□□□ 0.52
KRT28-201ENST00000306658 OSBPL8Q9BZF1 889 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms