RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 TLE2Q04725 743 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 BOP1Q14137 746 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 CLEC16AQ2KHT3 1053 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 HECTD3Q5T447 861 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 MTHFD1LQ6UB35 978 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SPIRE2Q8WWL2 714 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 ARHGEF26Q96DR7 871 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TRIM55Q9BYV6 548 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 DDX47Q9H0S4 455 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TASP1Q9H6P5 420 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 MLXIPLQ9NP71 852 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 UTP6Q9NYH9 597 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 STX18Q9P2W9 335 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 GMEB2Q9UKD1 530 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 RWDD3Q9Y3V2 267 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 SALL1Q9NSC2 1324 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CEMIPQ8WUJ3 1361 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 A6NNZ2 444 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 APODP05090 189 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 UCHL3P15374 230 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 GEMP55040 296 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 EFTUD2Q15029 972 aaKnown RBP eCLIP7.39□□□□□ -1.23
RAG1-201ENST00000299440 RAB30Q15771 203 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 HIF1AQ16665 826 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 TUBB8Q3ZCM7 444 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 DENND5BQ6ZUT9 1274 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 PATL1Q86TB9 770 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 TRAPPC5Q8IUR0 188 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 WDR49Q8IV35 697 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CPA6Q8N4T0 437 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 MMGT1Q8N4V1 131 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 KRT35Q92764 455 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 CLIP3Q96DZ5 547 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 ZFYVE19Q96K21 471 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 EML4Q9HC35 981 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 SMARCAL1Q9NZC9 954 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 RNF14Q9UBS8 474 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 XPO7Q9UIA9 1087 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 PPIEQ9UNP9 301 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 APOBEC2Q9Y235 224 aaKnown RBP7.39□□□□□ -1.23
RAG1-201ENST00000299440 ZNF521Q96K83 1311 aa7.39□□□□□ -1.23
RAG1-201ENST00000299440 LMTK2Q8IWU2 1503 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CLTBP09497 229 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 TROAPQ12815 778 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ANKRD20A4Q4UJ75 823 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ANKRD20A8PQ5CZ79 823 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 KCNT1Q5JUK3 1230 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ANKRD20A2Q5SQ80 823 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ANKRD20A1Q5TYW2 823 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 WSCD1Q658N2 575 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 TIGD7Q6NT04 549 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 DENND1CQ8IV53 801 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ZNF669Q96BR6 464 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 PANX2Q96RD6 677 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 GTPBP2Q9BX10 602 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 TRIM15Q9C019 465 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 UBP1Q9NZI7 540 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 VPS26AO75436 327 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 EIF2S1P05198 315 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 PNMA6AP0CW24 399 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 TUBP50607 506 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 EIF3BP55884 814 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 PTK6Q13882 451 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 DNAJC1Q96KC8 554 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 MARCH2Q9P0N8 246 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 KLHL3Q9UH77 587 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 TNFSF13BQ9Y275 285 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 TTC26A0AVF1 554 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 PHF20L1A8MW92 1017 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 NEDD8-MDP1E9PL57 170 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 GOLGA8RI6L899 631 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 POLBP06746 335 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CYP2A6P11509 494 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 PTPN7P35236 360 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 POU4F1Q01851 419 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CENPCQ03188 943 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 BCL2L1Q07817 233 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 UGP2Q16851 508 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 UGT3A1Q6NUS8 523 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 PDCD7Q8N8D1 485 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 SLC35G2Q8TBE7 412 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 SNF8Q96H20 258 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 SERAC1Q96JX3 654 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CHCHD3Q9NX63 227 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 ZC3H7BQ9UGR2 993 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 ZNHIT2Q9UHR6 403 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 PXDNQ92626 1479 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ACKR2O00590 384 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 NUDT14O95848 222 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 ADH1CP00326 375 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 GNRH1P01148 92 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CSH1P0DML2 217 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CSH2P0DML3 217 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 HTR1BP28222 390 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 HDDC3Q8N4P3 179 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 CXorf40BQ96DE9 158 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 SERPINB11Q96P15 392 aa7.38□□□□□ -1.23
RAG1-201ENST00000299440 C11orf84Q9BUA3 381 aaPredicted RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 ALG13Q9NP73 1137 aaKnown RBP7.38□□□□□ -1.23
RAG1-201ENST00000299440 CISHQ9NSE2 258 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms