RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 BBS2Q9BXC9 721 aa17.04■□□□□ 0.32
SNAPC4-201ENST00000298532 DCLK3Q9C098 648 aa17.04■□□□□ 0.32
SNAPC4-201ENST00000298532 MSH4O15457 936 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 MAFGO15525 162 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 SLC25A41Q8N5S1 370 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 TCP10LQ8TDR4 215 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 SLC20A1Q8WUM9 679 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 SGF29Q96ES7 293 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 TMEM79Q9BSE2 394 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 E9PBE3 544 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 KLHL41O60662 606 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 DDX5P17844 614 aaKnown RBP17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 TMEM161AQ9NX61 479 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 SALL1Q9NSC2 1324 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 GH1P01241 217 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 IL1R1P14778 569 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 MUTP22033 750 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 RGS2P41220 211 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 PKN1Q16512 942 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 LINC00523Q86TU6 105 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 OR6J1Q8NGC5 347 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 EPS8L2Q9H6S3 715 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 COPG1Q9Y678 874 aaKnown RBP17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 CLASP2O75122 1294 aaKnown RBP17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 RASSF9O75901 435 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 CPA3P15088 417 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 ZNF75CPQ92670 426 aaPredicted RBP17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 TUBGCP3Q96CW5 907 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 DDX18Q9NVP1 670 aaKnown RBP17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 MROH7Q68CQ1 1323 aa17.03■□□□□ 0.32
SNAPC4-201ENST00000298532 FAM237AA0A1B0GTK4 181 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 PSMG1O95456 288 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 FCGR1AP12314 374 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 CHRNB3Q05901 458 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 C16orf72Q14CZ0 275 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 AGAP9Q5VTM2 703 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 CKAP2Q8WWK9 683 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 RMND5BQ96G75 393 aaPredicted RBP17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 DNALI1O14645 258 aaPredicted RBP17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 UNC5CO95185 931 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 SLC45A4Q5BKX6 768 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 TTC23LQ6PF05 361 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 SLC5A5Q92911 643 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 LRRC4BQ9NT99 713 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 MPP6Q9NZW5 540 aa17.02■□□□□ 0.32
SNAPC4-201ENST00000298532 CDK16Q00536 496 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 MYBPC2Q14324 1141 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 IPMKQ8NFU5 416 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 AFG1LQ8WV93 481 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 TMEM39BQ9GZU3 492 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 TMEM245Q9H330 911 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 WDR70Q9NW82 654 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 EVPLLA8MZ36 301 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 PRKCEQ02156 737 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 CSTF3Q12996 717 aaKnown RBP17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 PDK2Q15119 407 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 APPL2Q8NEU8 664 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 GLMNQ92990 594 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 MMTAG2Q9BU76 263 aaKnown RBP17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 ZNF518BQ9C0D4 1074 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 LMCD1Q9NZU5 365 aa17.02■□□□□ 0.31
SNAPC4-201ENST00000298532 FAM205AQ6ZU69 1335 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 ADARP55265 1226 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 ZFP1Q6P2D0 407 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 CBWD2Q8IUF1 395 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 APOPT1Q96IL0 206 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 PAIP1Q9H074 479 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 CD274Q9NZQ7 290 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 ROR2Q01974 943 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 DDR1Q08345 913 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 KRT33BQ14525 404 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 C2CD6Q53TS8 623 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 ZNF662Q6ZS27 426 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 DNAAF5Q86Y56 855 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 UBA3Q8TBC4 463 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 MAP3K20Q9NYL2 800 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 STARD13Q9Y3M8 1113 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 PRR23D1E9PI22 279 aaPredicted RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 HIST1H2AGP0C0S8 130 aaPredicted RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 PRR23D2P0DMB1 279 aaPredicted RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 RARAP10276 462 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 RARBP10826 455 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 HIST1H2ADP20671 130 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 DCTN2Q13561 401 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 ZNF483Q8TF39 744 aaPredicted RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 HIST1H2AHQ96KK5 128 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 HIST1H2AJQ99878 128 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 H2AFJQ9BTM1 129 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 LZTS3O60299 673 aaPredicted RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 RPLP2P05387 115 aaKnown RBP17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 FKBP1CQ5VVH2 108 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 SH3RF1Q7Z6J0 888 aa17.01■□□□□ 0.31
SNAPC4-201ENST00000298532 SUPT7LO94864 414 aa17■□□□□ 0.31
SNAPC4-201ENST00000298532 BCL10O95999 233 aa17■□□□□ 0.31
SNAPC4-201ENST00000298532 NR3C2P08235 984 aa17■□□□□ 0.31
SNAPC4-201ENST00000298532 CYP2C8P10632 490 aa17■□□□□ 0.31
SNAPC4-201ENST00000298532 PYGMP11217 842 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms