RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 LSM8O95777 96 aaKnown RBP9.71□□□□□ -0.85
PRDM9-201ENST00000296682 INHBAP08476 426 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 ATP2A2P16615 1042 aaKnown RBP9.71□□□□□ -0.85
PRDM9-201ENST00000296682 KRT4P19013 534 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 AMPD1P23109 780 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 RBL1P28749 1068 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 CDKN2BP42772 138 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 MAGEA9P43362 315 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 MAP3K7CLP57077 242 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 ACTN3Q08043 901 aaPredicted RBP9.71□□□□□ -0.85
PRDM9-201ENST00000296682 MFSD10Q14728 455 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 CA9Q16790 459 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 DUSP28Q4G0W2 176 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 PYROXD2Q8N2H3 581 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 PPP1R14CQ8TAE6 165 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 FBF1Q8TES7 1133 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 EPB41L4BQ9H329 900 aa9.71□□□□□ -0.85
PRDM9-201ENST00000296682 CITO14578 2027 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 TP73O15350 636 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 CDH16O75309 829 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 LGR5O75473 907 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 FBXO47Q5MNV8 452 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 OLFML2BQ68BL8 750 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 SLC27A1Q6PCB7 646 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 TMEM40Q8WWA1 233 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 ASB7Q9H672 318 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 HAUS2Q9NVX0 235 aa9.71□□□□□ -0.86
PRDM9-201ENST00000296682 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.71□□□□□ -0.86
PRDM9-201ENST00000296682 CCDC195A0A1B0GUA6 201 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 DNALI1O14645 258 aaPredicted RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 FAM189A1O60320 539 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 F7P08709 466 aaPredicted RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 SRGAP2BP0DMP2 458 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 GPD2P43304 727 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 NDUFV1P49821 464 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 CNGA2Q16280 664 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 WSCD1Q658N2 575 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 CES3Q6UWW8 571 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 APBB1IPQ7Z5R6 666 aaPredicted RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 APOL2Q9BQE5 337 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 SLCO1B3Q9NPD5 702 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 SLC12A6Q9UHW9 1150 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 KPNA7A9QM74 516 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 MT-ND3P03897 115 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 KITP10721 976 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ELK3P41970 407 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 AFF1P51825 1210 aaKnown RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ADIGQ0VDE8 80 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ZNF792Q3KQV3 632 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 CDCA2Q69YH5 1023 aaPredicted RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 LRRC8CQ8TDW0 803 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 DEPDC1BQ8WUY9 529 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 FAXDC2Q96IV6 333 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 CNPY3Q9BT09 278 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ZNF518BQ9C0D4 1074 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 KCNK1O00180 336 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 CYB561D2O14569 222 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 USP12O75317 370 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 B3GAT3O94766 335 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 MOCS2O96007 188 aaPredicted RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 CPP00450 1065 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 NUDT17P0C025 328 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ARL4AP40617 200 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 MLH1P40692 756 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 SULT1E1P49888 294 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 BMPR2Q13873 1038 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 SPARCL1Q14515 664 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 MDH1BQ5I0G3 518 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 FNBP1LQ5T0N5 605 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 RWDD4Q6NW29 188 aaKnown RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 ARHGEF18Q6ZSZ5 1173 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 USP33Q8TEY7 942 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 PTPRHQ9HD43 1115 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 UBP1Q9NZI7 540 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 IL1RAPL1Q9NZN1 696 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 MYO18AQ92614 2054 aaKnown RBP9.7□□□□□ -0.86
PRDM9-201ENST00000296682 PLXNB2O15031 1838 aa9.7□□□□□ -0.86
PRDM9-201ENST00000296682 IGKV6-21A0A0C4DH24 114 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 A0A0G2JND7 137 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 SMIM28A0A1B0GU29 152 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 A0A1B0GUA9 196 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 M0QYT0 321 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 APOL1O14791 398 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 FAM155BO75949 473 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 GHRP10912 638 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 THPOP40225 353 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 IL9RQ01113 521 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 TAP1Q03518 808 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 TFDP2Q14188 446 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 PACS2Q86VP3 889 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 TTC30AQ86WT1 665 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 SCN4BQ8IWT1 228 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 ARFGAP1Q8N6T3 406 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 SLC7A14Q8TBB6 771 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 L3MBTL3Q96JM7 780 aaPredicted RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 TACO1Q9BSH4 297 aaKnown RBP9.69□□□□□ -0.86
PRDM9-201ENST00000296682 KLHL14Q9P2G3 628 aa9.69□□□□□ -0.86
PRDM9-201ENST00000296682 WDR35Q9P2L0 1181 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms