RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LRRC19Q9H756 370 aa23.94■■□□□ 1.42
PTX3-201ENST00000295927 CSNK1G1Q9HCP0 422 aa23.94■■□□□ 1.42
PTX3-201ENST00000295927 PCYOX1Q9UHG3 505 aa23.94■■□□□ 1.42
PTX3-201ENST00000295927 ADAM28Q9UKQ2 775 aa23.94■■□□□ 1.42
PTX3-201ENST00000295927 BHMG1C9JSJ3 638 aaPredicted RBP23.93■■□□□ 1.42
PTX3-201ENST00000295927 KRT10P13645 584 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 BDNFP23560 247 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 COILP38432 576 aaPredicted RBP23.93■■□□□ 1.42
PTX3-201ENST00000295927 SLC11A1P49279 550 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 TKTL1P51854 596 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 IKBKEQ14164 716 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 MAPRE1Q15691 268 aaKnown RBP23.93■■□□□ 1.42
PTX3-201ENST00000295927 CCDC137Q6PK04 289 aaKnown RBP23.93■■□□□ 1.42
PTX3-201ENST00000295927 FAM172AQ8WUF8 416 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 COLEC11Q9BWP8 271 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 UBXN6Q9BZV1 441 aa23.93■■□□□ 1.42
PTX3-201ENST00000295927 NGRNQ9NPE2 291 aaKnown RBP23.93■■□□□ 1.42
PTX3-201ENST00000295927 KIAA0100Q14667 2235 aaKnown RBP23.93■■□□□ 1.42
PTX3-201ENST00000295927 C3orf70A6NLC5 250 aaPredicted RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 HHLA1C9JL84 531 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 OAZ2O95190 189 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 PTPN7P35236 360 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 CDKN2BP42772 138 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 PTGIRP43119 386 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 PTPN9P43378 593 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 CARSP49589 748 aaKnown RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 TRADDQ15628 312 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 TFDP3Q5H9I0 405 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 KAZNQ674X7 775 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 GPRIN1Q7Z2K8 1008 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 MARCH5Q9NX47 278 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 FAN1Q9Y2M0 1017 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 HSF2BPO75031 334 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 UPP2O95045 317 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 DESP17661 470 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 RFC2P35250 354 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 ADCY2Q08462 1091 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 RAB41Q5JT25 222 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 CYP4V2Q6ZWL3 525 aaPredicted RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 CMASQ8NFW8 434 aaPredicted RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 IFT81Q8WYA0 676 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 TRIM51Q9BSJ1 452 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 C11orf84Q9BUA3 381 aaPredicted RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 DDX23Q9BUQ8 820 aaKnown RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 CHST7Q9NS84 486 aa23.92■■□□□ 1.42
PTX3-201ENST00000295927 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTX3-201ENST00000295927 R3HDM2Q9Y2K5 976 aaKnown RBP23.92■■□□□ 1.42
PTX3-201ENST00000295927 hCG_1818297A0A087WSY0 165 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 FAM187AA6NFU0 413 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 SYN3O14994 580 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 TFE3P19532 575 aaPredicted RBP23.91■■□□□ 1.42
PTX3-201ENST00000295927 KDELR1P24390 212 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 FNTAP49354 379 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 ATG4AQ8WYN0 398 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 HSPH1Q92598 858 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 FAM149B1Q96BN6 582 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 RUNDC3BQ96NL0 473 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 ULBP1Q9BZM6 244 aa23.91■■□□□ 1.42
PTX3-201ENST00000295927 PRPSAP2O60256 369 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 FBXO21O94952 628 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 GALTP07902 379 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 KCNJ1P48048 391 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 CTCFP49711 727 aaPredicted RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 VARS2Q5ST30 1063 aaKnown RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 FAM171A1Q5VUB5 890 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 SCYL2Q6P3W7 929 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 JAMLQ86YT9 394 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 DEFB106AQ8N104 65 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 AENQ8WTP8 325 aaKnown RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 CENPIQ92674 756 aaPredicted RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 NCAPGQ9BPX3 1015 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 TMEM175Q9BSA9 504 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 FUT8Q9BYC5 575 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 ADAM33Q9BZ11 813 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 GPR62Q9BZJ7 368 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 DCLK3Q9C098 648 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 UTP11Q9Y3A2 253 aaKnown RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 LTBP2Q14767 1821 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 TJP3O95049 919 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 OR4Q2P0C623 313 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 MATKP42679 507 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 HDAC4P56524 1084 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 YWHAZP63104 245 aaKnown RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 SNX1Q13596 522 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 NECAB2Q7Z6G3 386 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 CCDC105Q8IYK2 499 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 LRRC43Q8N309 656 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 KCTD6Q8NC69 237 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 ZCWPW1Q9H0M4 648 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 DMAP1Q9NPF5 467 aaPredicted RBP23.9■■□□□ 1.42
PTX3-201ENST00000295927 NFU1Q9UMS0 254 aa23.9■■□□□ 1.42
PTX3-201ENST00000295927 PATJQ8NI35 1801 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 NT5C1B-RDH14C9J2C7 533 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 DAB1O75553 588 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 CD48P09326 243 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 ITGB8P26012 769 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 DAOAP59103 153 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 TAZQ16635 292 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 C4orf50Q6ZRC1 276 aa23.89■■□□□ 1.42
PTX3-201ENST00000295927 CEP57Q86XR8 500 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms