RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 FAM71DQ8N9W8 422 aa10.58□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF512Q96ME7 567 aaPredicted RBP10.58□□□□□ -0.72
CLDN1-201ENST00000295522 SENP6Q9GZR1 1112 aaPredicted RBP10.58□□□□□ -0.72
CLDN1-201ENST00000295522 TRPV6Q9H1D0 765 aa10.58□□□□□ -0.72
CLDN1-201ENST00000295522 ACSS3Q9H6R3 686 aa10.58□□□□□ -0.72
CLDN1-201ENST00000295522 XAB2Q9HCS7 855 aaKnown RBP10.58□□□□□ -0.72
CLDN1-201ENST00000295522 SCN11AQ9UI33 1791 aa10.58□□□□□ -0.72
CLDN1-201ENST00000295522 GOLGA8QA0A0J9YX86 632 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 TCRBV7S3A2A0A539 114 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 GOLGA8OA6NCC3 632 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 GOLGA8NF8WBI6 632 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 CBFA2T3O75081 653 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 CFBP00751 764 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ETFBP38117 255 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 HNRNPDQ14103 355 aaKnown RBP10.57□□□□□ -0.72
CLDN1-201ENST00000295522 NXNQ6DKJ4 435 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 CBWD2Q8IUF1 395 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 RAVER1Q8IY67 606 aaKnown RBP10.57□□□□□ -0.72
CLDN1-201ENST00000295522 XXYLT1Q8NBI6 393 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 DEPTORQ8TB45 409 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 TAS1R2Q8TE23 839 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 COX4I2Q96KJ9 171 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 STRIP2Q9ULQ0 834 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ARHGEF37A1IGU5 675 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ZC3H11AO75152 810 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLDN1-201ENST00000295522 LDHCP07864 332 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 CD151P48509 253 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ITPK1Q13572 414 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 GRM2Q14416 872 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 HYIQ5T013 277 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 BSPRYQ5W0U4 402 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ZFPM1Q8IX07 1006 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 MCOLN2Q8IZK6 566 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 JADE3Q92613 823 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 SEMA4DQ92854 862 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 SETDB2Q96T68 719 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 GPATCH1Q9BRR8 931 aaKnown RBP10.57□□□□□ -0.72
CLDN1-201ENST00000295522 FOXP3Q9BZS1 431 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 HSPBP1Q9NZL4 362 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 DNAJB4Q9UDY4 337 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
CLDN1-201ENST00000295522 CAPN14A8MX76 684 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 MSH4O15457 936 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 GAS7O60861 476 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 PROSCO94903 275 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 TGDSO95455 350 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 THRAP10827 490 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 CLCN2P51788 898 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 SLC18A1P54219 525 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ITGADQ13349 1161 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF394Q53GI3 561 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 FAM71AQ8IYT1 594 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 RTKN2Q8IZC4 609 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 FAM156AQ8NDB6 213 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 POMGNT1Q8WZA1 660 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 PGBD4Q96DM1 585 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 MPHOSPH6Q99547 160 aaKnown RBP10.57□□□□□ -0.72
CLDN1-201ENST00000295522 HEPHQ9BQS7 1158 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 TMEM79Q9BSE2 394 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 TRPC7Q9HCX4 862 aa10.57□□□□□ -0.72
CLDN1-201ENST00000295522 ATP8B3O60423 1300 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 TCRBV9S1A1TA0A576 114 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SH3PXD2BA1X283 911 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 TMX2-CTNND1H3BSU7 103 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 K7EPI3 171 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 SERPINA6P08185 405 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CDH3P22223 829 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 RFX1P22670 979 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 GDF10P55107 478 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 PSMC5P62195 406 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CD300CQ08708 224 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 RNASEH2BQ5TBB1 312 aaKnown RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 PDPK2PQ6A1A2 396 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CASC4Q6P4E1 433 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 MYO1HQ8N1T3 1032 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF786Q8N393 782 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 GABPB2Q8TAK5 448 aaPredicted RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 DCAKDQ8WVC6 231 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CALN1Q9BXU9 219 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 OSBPL6Q9BZF3 934 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 NACA2Q9H009 215 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ACSS2Q9NR19 701 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CICQ96RK0 1608 aaPredicted RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CAMTA1Q9Y6Y1 1673 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 ITM2AO43736 263 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 NTSR2O95665 410 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 OXSR1O95747 527 aaPredicted RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 S100BP04271 92 aaPredicted RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 MCF2P10911 925 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 GSTO1P78417 241 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 CLEC16AQ2KHT3 1053 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 EML3Q32P44 896 aa10.56□□□□□ -0.72
CLDN1-201ENST00000295522 THOC7Q6I9Y2 204 aaKnown RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 INTS5Q6P9B9 1019 aaKnown RBP10.56□□□□□ -0.72
CLDN1-201ENST00000295522 GPR141Q7Z602 305 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms