RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PALB2Q86YC2 1186 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 PGBD3Q8N328 593 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 C12orf29Q8N999 325 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 MCRS1Q96EZ8 462 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 CAPZA3Q96KX2 299 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 HINFPQ9BQA5 517 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 IL37Q9NZH6 218 aa8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 TIMM13Q9Y5L4 95 aaPredicted RBP8.86□□□□□ -0.99
PTPDC1-201ENST00000288976 CENPFP49454 3210 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 HHLA1C9JL84 531 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 H3BNC9 293 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 TAS1R1Q7RTX1 841 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 PHLDB2Q86SQ0 1253 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 XYLT1Q86Y38 959 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 SCN4BQ8IWT1 228 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 RIN2Q8WYP3 895 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 OVCA2Q8WZ82 227 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 DESI2Q9BSY9 194 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 TLR9Q9NR96 1032 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM49BQ9NUQ9 324 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 TAS2R14Q9NYV8 317 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 ADAM22Q9P0K1 906 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 MYBPHLA2RUH7 354 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 HAPLN1P10915 354 aaPredicted RBP8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 IGFBP4P22692 258 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 ACAT1P24752 427 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 ORC1Q13415 861 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 SLC39A12Q504Y0 691 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 NYAP1Q6ZVC0 841 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 SYCE1Q8N0S2 351 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 FNIP1Q8TF40 1166 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 CYTH4Q9UIA0 394 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 LCHNA4D1U4 455 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 MTMR11A4FU01 709 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 GAS8O95995 478 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 CFHP08603 1231 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 ADORA2BP29275 332 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 RPL10AP62906 217 aaKnown RBP8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 VPS52Q8N1B4 723 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 NIPA2Q8N8Q9 360 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 NCAPGQ9BPX3 1015 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 PCDHGC5Q9Y5F6 944 aa8.85□□□□□ -0.99
PTPDC1-201ENST00000288976 HCRTO43612 131 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 AP1G2O75843 785 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 RTN3O95197 1032 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PTPN20Q4JDL3 420 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TRIM58Q8NG06 486 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CPA5Q8WXQ8 436 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 C18orf8Q96DM3 657 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CLSTN3Q9BQT9 956 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 THAP2Q9H0W7 228 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 LZTFL1Q9NQ48 299 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 MAGED2Q9UNF1 606 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 GREB1Q4ZG55 1949 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 SLU7O95391 586 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CASQ1P31415 396 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TUFMP49411 452 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CYP27A1Q02318 531 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ACAP1Q15027 740 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TMCO3Q6UWJ1 677 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 LRRTM3Q86VH5 581 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ARHGAP18Q8N392 663 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF276Q8N554 614 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 SPPL3Q8TCT6 385 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 SMOQ99835 787 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PPANQ9NQ55 473 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CNGB3Q9NQW8 809 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TMLHEQ9NVH6 421 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 YBX2Q9Y2T7 364 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 FAM92AA1XBS5 289 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 SIGLEC16A6NMB1 481 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 KIAA0754O94854 1291 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 VNN2O95498 520 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CPB1P15086 417 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ROR1Q01973 937 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 MMS22LQ6ZRQ5 1243 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PASD1Q8IV76 773 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TCEAL8Q8IYN2 117 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ZNF461Q8TAF7 563 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CDCA3Q99618 268 aaPredicted RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PACSIN1Q9BY11 444 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PBX4Q9BYU1 374 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 TRIM31Q9BZY9 425 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CNOT8Q9UFF9 292 aaKnown RBP8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 USP3Q9Y6I4 520 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 BRCA2P51587 3418 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ESPNB1AK53 854 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 DAB1O75553 588 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 CALCAP01258 141 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ADH1AP07327 375 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 ABCB4P21439 1286 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 PBX3P40426 434 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 SLC1A1P43005 524 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 RABGGTBP53611 331 aa8.84□□□□□ -0.99
PTPDC1-201ENST00000288976 MAMLD1Q13495 774 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms