RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 EIF2AQ9BY44 585 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 RNF112Q9ULX5 631 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 DRG1Q9Y295 367 aaKnown RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 PDE1CQ14123 709 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SYTL1Q8IYJ3 562 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF655Q8N720 491 aaPredicted RBP14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 GLMNQ92990 594 aa14.06□□□□□ -0.16
PDGFRB-201ENST00000261799 SLC8A1P32418 973 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 MLH1P40692 756 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM133BQ5BKY9 247 aaKnown RBP14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 PPP2R2DQ66LE6 453 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 MOB2Q70IA6 237 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 CHMP1BQ7LBR1 199 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 LPCAT1Q8NF37 534 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 VPS50Q96JG6 964 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 C11orf49Q9H6J7 331 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 ACKR2O00590 384 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 PSTPIP1O43586 416 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 TRAPPC12Q8WVT3 735 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 PNKPQ96T60 521 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 RIOX1Q9H6W3 641 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 H2AFY2Q9P0M6 372 aaPredicted RBP14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 ZFP69BQ9UJL9 534 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 OPLAHO14841 1288 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 SPAG7O75391 227 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 LSM8O95777 96 aaKnown RBP14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 ADH1CP00326 375 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 TM4SF1P30408 202 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 NOL9Q5SY16 702 aaKnown RBP14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 NUGGCQ68CJ6 796 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 LRRC8EQ6NSJ5 796 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 CLYBLQ8N0X4 340 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 TNIP2Q8NFZ5 429 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 ZFYVE19Q96K21 471 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM167BQ9BTA0 163 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 GPN3Q9UHW5 284 aaPredicted RBP14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 CST8O60676 142 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 RAMP2O60895 175 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 OR1E1P30953 314 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 ITGA9Q13797 1035 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 DOK6Q6PKX4 331 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 TPGS1Q6ZTW0 290 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 ARMC2Q8NEN0 867 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 JADE3Q92613 823 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
PDGFRB-201ENST00000261799 SYCE1LA8MT33 242 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 PCNAP12004 261 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 GRB10Q13322 594 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CLEC16AQ2KHT3 1053 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CBWD2Q8IUF1 395 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 COG1Q8WTW3 980 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 BRD9Q9H8M2 597 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DEPDC5O75140 1603 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CSH1P0DML2 217 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CSH2P0DML3 217 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 SCNN1BP51168 640 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 SCNN1GP51170 649 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ITGA7Q13683 1181 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 NAB2Q15742 525 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ATAT1Q5SQI0 421 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 C16orf59Q7L2K0 433 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 GET4Q7L5D6 327 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 TNS4Q8IZW8 715 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 PLEKHA8Q96JA3 519 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF556Q9HAH1 456 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF510Q9Y2H8 683 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF541Q9H0D2 1346 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 KPNA3O00505 521 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 TMEM253P0C7T8 217 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CYP2A7P20853 494 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CDC25CP30307 473 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CRYBB1P53674 252 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ZNF200P98182 395 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 GRIN1Q05586 938 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 SETMARQ53H47 684 aaPredicted RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 KLHDC7AQ5VTJ3 777 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 SPRYD7Q5W111 196 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 NLGN2Q8NFZ4 835 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 SERAC1Q96JX3 654 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 SOHLH2Q9NX45 425 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DDX20Q9UHI6 824 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DNMT3LQ9UJW3 386 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 MMEP08473 750 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 AMD1P17707 334 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 GTF2E2P29084 291 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 PSMC6P62333 389 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 PSMD5Q16401 504 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 FAM46CQ5VWP2 391 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 METTL16Q86W50 562 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 HOMEZQ8IX15 550 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 KLHL29Q96CT2 875 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 VMP1Q96GC9 406 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DDX47Q9H0S4 455 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 ZDHHC6Q9H6R6 413 aa14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 DDX4Q9NQI0 724 aaKnown RBP14.04□□□□□ -0.16
PDGFRB-201ENST00000261799 LACTBL1A8MY62 500 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms