RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
KPNA3-201ENST00000261667 SQORQ9Y6N5 450 aa11.03□□□□□ -0.64
KPNA3-201ENST00000261667 TNKSO95271 1327 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 SALL3Q9BXA9 1300 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 TMEM114B3SHH9 223 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 EIF3FO00303 357 aaPredicted RBP11.02□□□□□ -0.64
KPNA3-201ENST00000261667 TFECO14948 347 aaPredicted RBP11.02□□□□□ -0.64
KPNA3-201ENST00000261667 KCNQ3O43525 872 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 MAPRE1Q15691 268 aaKnown RBP11.02□□□□□ -0.64
KPNA3-201ENST00000261667 FAM47AQ5JRC9 791 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 RFWD3Q6PCD5 774 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 ACMSDQ8TDX5 336 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 XAGE2Q96GT9 111 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 LIN28AQ9H9Z2 209 aaKnown RBP11.02□□□□□ -0.64
KPNA3-201ENST00000261667 CHMP1AQ9HD42 196 aaPredicted RBP11.02□□□□□ -0.64
KPNA3-201ENST00000261667 VPS45Q9NRW7 570 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 ZNF510Q9Y2H8 683 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 HEY1Q9Y5J3 304 aa11.02□□□□□ -0.64
KPNA3-201ENST00000261667 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.02□□□□□ -0.64
KPNA3-201ENST00000261667 I3L521 148 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
KPNA3-201ENST00000261667 S100A6P06703 90 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 IL2RBP14784 551 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 NME3Q13232 169 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 SCYL2Q6P3W7 929 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 TTC7BQ86TV6 843 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 STK32CQ86UX6 486 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 RTKN2Q8IZC4 609 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 OR8H1Q8NGG4 311 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 OXER1Q8TDS5 423 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 ZNF496Q96IT1 587 aaPredicted RBP11.02□□□□□ -0.65
KPNA3-201ENST00000261667 ZNF277Q9NRM2 450 aaPredicted RBP11.02□□□□□ -0.65
KPNA3-201ENST00000261667 GPRC5DQ9NZD1 345 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 KIF17Q9P2E2 1029 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 ZNF532Q9HCE3 1301 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 H7C1W4 665 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 M0QX08 132 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
KPNA3-201ENST00000261667 IL32P24001 234 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 PSMC2P35998 433 aaKnown RBP11.02□□□□□ -0.65
KPNA3-201ENST00000261667 RHAGQ02094 409 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 DUS1LQ6P1R4 473 aaKnown RBP11.02□□□□□ -0.65
KPNA3-201ENST00000261667 KCNK18Q7Z418 384 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 ZNF354CQ86Y25 554 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 TPCN2Q8NHX9 752 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 RORBQ92753 470 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 DCUN1D1Q96GG9 259 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 EFCAB1Q9HAE3 211 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 ARL8BQ9NVJ2 186 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
KPNA3-201ENST00000261667 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 TYK2P29597 1187 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 AQP4P55087 323 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 FXNQ16595 210 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 SNAP47Q5SQN1 464 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 FERD3LQ96RJ6 166 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 CALN1Q9BXU9 219 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 FOXP3Q9BZS1 431 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 MLXQ9UH92 298 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PHLPP1O60346 1717 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PTGES3LE9PB15 166 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 HSMCR30P0CW71 290 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 FCER1AP12319 257 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PSMA4P25789 261 aaKnown RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 TSC22D1Q15714 1073 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 ZC3H12BQ5HYM0 836 aaKnown RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PRR23BQ6ZRT6 265 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 ZSCAN18Q8TBC5 510 aaPredicted RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 ERGIC2Q96RQ1 377 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 DCLK3Q9C098 648 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 CXorf21Q9HAI6 301 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 S100A14Q9HCY8 104 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PCDHA12Q9UN75 941 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 KRT87PA6NCN2 255 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 F8W8V4 182 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 GAS2O43903 313 aaKnown RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PDE9AO76083 593 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PAEPP09466 180 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 TFE3P19532 575 aaPredicted RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 CCND2P30279 289 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 ECT2LQ008S8 904 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 GNA12Q03113 381 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 CLNKQ7Z7G1 428 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 NDUFAF2Q8N183 169 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 DHRSXQ8N5I4 330 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 VTI1AQ96AJ9 217 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 MRPL47Q9HD33 250 aaKnown RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 FBXO6Q9NRD1 293 aaPredicted RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 ATP8A2Q9NTI2 1148 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 RGS17Q9UGC6 210 aaPredicted RBP11.01□□□□□ -0.65
KPNA3-201ENST00000261667 GNPTGQ9UJJ9 305 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
KPNA3-201ENST00000261667 UTYO14607 1347 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms