RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ASB2Q96Q27 587 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 EMILIN2Q9BXX0 1053 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 GPR62Q9BZJ7 368 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 SYNCQ9H7C4 482 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 ARGLU1Q9NWB6 273 aaPredicted RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 WDR35Q9P2L0 1181 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 HESX1Q9UBX0 185 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 IP6K2Q9UHH9 426 aa18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TTC7AQ9ULT0 858 aaPredicted RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 TIMM13Q9Y5L4 95 aaPredicted RBP18.36■□□□□ 0.53
SRSF1-201ENST00000258962 SIGLEC16A6NMB1 481 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 E5RJQ4 531 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 I3L4J1 428 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
SRSF1-201ENST00000258962 GABBR2O75899 941 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 RHOXF2BP0C7M4 288 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 ADORA2BP29275 332 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 BRCC3P46736 316 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 RGS7P49802 495 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 PDE4CQ08493 712 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 AADACL2Q6P093 401 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 PMF1Q6P1K2 205 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 IPO4Q8TEX9 1081 aaKnown RBP18.35■□□□□ 0.53
SRSF1-201ENST00000258962 RHOXF2Q9BQY4 288 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 SLC4A5Q9BY07 1137 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 DDX43Q9NXZ2 648 aaKnown RBP18.35■□□□□ 0.53
SRSF1-201ENST00000258962 TMEM59LQ9UK28 342 aa18.35■□□□□ 0.53
SRSF1-201ENST00000258962 TMEM189-UBE2V1I3L0A0 370 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 LINC01565O15544 149 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 PTPN1P18031 435 aaKnown RBP18.34■□□□□ 0.53
SRSF1-201ENST00000258962 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
SRSF1-201ENST00000258962 LHX1P48742 406 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 TAS2R40P59535 323 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 FAM171A1Q5VUB5 890 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 DCUN1D2Q6PH85 259 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 CEP57Q86XR8 500 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 RNF168Q8IYW5 571 aaPredicted RBP18.34■□□□□ 0.53
SRSF1-201ENST00000258962 ANKRD52Q8NB46 1076 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
SRSF1-201ENST00000258962 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 STK32AQ8WU08 396 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 HNRNPABQ99729 332 aaKnown RBP18.34■□□□□ 0.53
SRSF1-201ENST00000258962 DNAI2Q9GZS0 605 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 CRTAC1Q9NQ79 661 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 ST7Q9NRC1 585 aa18.34■□□□□ 0.53
SRSF1-201ENST00000258962 METTL5Q9NRN9 209 aaKnown RBP18.34■□□□□ 0.53
SRSF1-201ENST00000258962 H3BQ06 376 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-201ENST00000258962 M0QZQ0 153 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 PIK3R2O00459 728 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 CLASP2O75122 1294 aaKnown RBP18.33■□□□□ 0.53
SRSF1-201ENST00000258962 EFEMP2O95967 443 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 CYP11A1P05108 521 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 ODC1P11926 461 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 KRT3P12035 628 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 H2AFXP16104 143 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-201ENST00000258962 KLRC2P26717 231 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 BCAT1P54687 386 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 DSG1Q02413 1049 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 BST2Q10589 180 aaKnown RBP18.33■□□□□ 0.53
SRSF1-201ENST00000258962 FAM183BPQ6ZVS7 135 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 FUKQ8N0W3 1084 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 RIN2Q8WYP3 895 aaPredicted RBP18.33■□□□□ 0.53
SRSF1-201ENST00000258962 PNKPQ96T60 521 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 RTP3Q9BQQ7 232 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 TTPALQ9BTX7 342 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 PARD6BQ9BYG5 372 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 CHST7Q9NS84 486 aa18.33■□□□□ 0.53
SRSF1-201ENST00000258962 PTPRDP23468 1912 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 PRUNE2Q8WUY3 3088 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 PYGMP11217 842 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 PAX3P23760 479 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 LTBRP36941 435 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 RWDD2BP57060 319 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 LEXMQ3ZCV2 418 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 TJAP1Q5JTD0 557 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 FBXO38Q6PIJ6 1188 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 TMEM110Q86TL2 294 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 GPR65Q8IYL9 337 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 NIPA2Q8N8Q9 360 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 PIWIL1Q96J94 861 aaKnown RBP18.33■□□□□ 0.52
SRSF1-201ENST00000258962 B3GALT6Q96L58 329 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 SYT15Q9BQS2 421 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.33■□□□□ 0.52
SRSF1-201ENST00000258962 LCMT1Q9UIC8 334 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 USTQ9Y2C2 406 aa18.33■□□□□ 0.52
SRSF1-201ENST00000258962 ATG2AQ2TAZ0 1938 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 VWA8A3KMH1 1905 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 F8VP50 259 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 CLDN5O00501 218 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 LILRB3O75022 631 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 FGGP02679 453 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 CNPP09543 421 aaKnown RBP18.32■□□□□ 0.52
SRSF1-201ENST00000258962 TCF4P15884 667 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 RPL34P49207 117 aaKnown RBP18.32■□□□□ 0.52
SRSF1-201ENST00000258962 CREMQ03060 361 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 PUS10Q3MIT2 529 aaKnown RBP18.32■□□□□ 0.52
SRSF1-201ENST00000258962 MDH1BQ5I0G3 518 aa18.32■□□□□ 0.52
SRSF1-201ENST00000258962 FAM102AQ5T9C2 384 aaPredicted RBP18.32■□□□□ 0.52
SRSF1-201ENST00000258962 OR6B2Q6IFH4 312 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms