RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ALKBH8Q96BT7 664 aaKnown RBP13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 GAD1Q99259 594 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 USP20Q9Y2K6 914 aa13.94□□□□□ -0.18
PRPF38A-201ENST00000257181 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 TBC1D3BA6NDS4 549 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 PIK3R2O00459 728 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 CHUKO15111 745 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 RB1P06400 928 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 POLBP06746 335 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 WEE2P0C1S8 567 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 MYBL2P10244 700 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 GTF2BQ00403 316 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 STRADAQ7RTN6 431 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 AHCYL2Q96HN2 611 aaKnown RBP13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 POPDC2Q9HBU9 364 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 METTL5Q9NRN9 209 aaKnown RBP13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 SCNN1GP51170 649 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 THOP1P52888 689 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 ANKS6Q68DC2 871 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 SLC35F6Q8N357 371 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 GPT2Q8TD30 523 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 IRF2BPLQ9H1B7 796 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 PALMO75781 387 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 PCDH8O95206 1070 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 GNSP15586 552 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 MAPK1P28482 360 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 WDR75Q8IWA0 830 aaKnown RBP13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 OR8D1Q8WZ84 308 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 GOLPH3Q9H4A6 298 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
PRPF38A-201ENST00000257181 HSPA4LO95757 839 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 YWHAZP63104 245 aaKnown RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 UBE3AQ05086 875 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 LZICQ8WZA0 190 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 CCDC126Q96EE4 140 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 ACO2Q99798 780 aaKnown RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SETD1AO15047 1707 aaKnown RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 PTPN1P18031 435 aaKnown RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SPRP35270 261 aaPredicted RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 PLTPP55058 493 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 GRSF1Q12849 480 aaKnown RBP eCLIP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 MPPE1Q53F39 396 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 TEDDM1Q5T9Z0 273 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 ABHD15Q6UXT9 468 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SLC9A9Q8IVB4 645 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 RNF25Q96BH1 459 aaPredicted RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 WDR41Q9HAD4 459 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 VPS18Q9P253 973 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 A0A1B0GTH6 734 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 KCNN4O15554 427 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 FTCDO95954 541 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 ASLP04424 464 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 MLH1P40692 756 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 TDRD5Q8NAT2 981 aaKnown RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SAYSD1Q9NPB0 183 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 FAM86B1E9PN63 330 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SUN1O94901 812 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 FAM86B2P0C5J1 330 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 PRAMEF19Q5SWL8 479 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 TMTC4Q5T4D3 741 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 LRRC8EQ6NSJ5 796 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SAPCD2Q86UD0 394 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 CRLF3Q8IUI8 442 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 CCDC60Q8IWA6 550 aaPredicted RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 DESI2Q9BSY9 194 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 DYRK1BQ9Y463 629 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SALL3Q9BXA9 1300 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 SERPINF2P08697 491 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 ITIH2P19823 946 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 C12orf56Q8IXR9 622 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 RGL4Q8IZJ4 473 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 CORO1BQ9BR76 489 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 PDGFDQ9GZP0 370 aaPredicted RBP13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 MAN1C1Q9NR34 630 aa13.92□□□□□ -0.18
PRPF38A-201ENST00000257181 AOC2O75106 756 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 VPS26AO75436 327 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 SOAT2O75908 522 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 DNTTP04053 509 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 CYP11B1P15538 503 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 HDCP19113 662 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 STAT4Q14765 748 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 E4F1Q66K89 784 aaPredicted RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 RTL10Q7L3V2 364 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 STK40Q8N2I9 435 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 ARMC2Q8NEN0 867 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 KIAA1522Q9P206 1035 aaPredicted RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 ZFATQ9P243 1243 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 ITM2BQ9Y287 266 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 PYGBP11216 843 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 CTSEP14091 401 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
PRPF38A-201ENST00000257181 PKN1Q16512 942 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms