RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 RBP3P10745 1247 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 SOX10P56693 466 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 FUT11Q495W5 492 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 PLD3Q8IV08 490 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 CENPLQ8N0S6 344 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 TMCO5AQ8N6Q1 288 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 FBXO36Q8NEA4 188 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 OSMRQ99650 979 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 CBWD1Q9BRT8 395 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 RMND5AQ9H871 391 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 COPS7BQ9H9Q2 264 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 WHRNQ9P202 907 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 SPASTQ9UBP0 616 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 VPS28Q9UK41 221 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 ADM5C9JUS6 153 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 ARHGEF9O43307 516 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 MAN1A2O60476 641 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 F9P00740 461 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 EPB42P16452 691 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 TCN1P20061 433 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 RHOAP61586 193 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 CAMK2GQ13555 558 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 DEFB132Q7Z7B7 95 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 SETD3Q86TU7 594 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 ARMC2Q8NEN0 867 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 RIN2Q8WYP3 895 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 IL25Q9H293 177 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 CYP3A43Q9HB55 503 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 EIF4E1BA6NMX2 242 aaKnown RBP9.01□□□□□ -0.97
PTCD3-201ENST00000254630 ZNF284Q2VY69 593 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 GALNTL6Q49A17 601 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 ADGRE3Q9BY15 652 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 MAN1C1Q9NR34 630 aa9.01□□□□□ -0.97
PTCD3-201ENST00000254630 FOXN3O00409 490 aaPredicted RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 POMCP01189 267 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 KCNJ1P48048 391 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TKTL1P51854 596 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TROAPQ12815 778 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 PTPAQ15257 358 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 PDLIM2Q96JY6 352 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 C16orf96A6NNT2 1141 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 GUCA1CO95843 209 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ALDH2P05091 517 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 DNAJB2P25686 324 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 HERVK_113P62684 666 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 FKBP1AP62942 108 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 PLOD1Q02809 727 aaPredicted RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 ERAP2Q6P179 960 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 DRG1Q9Y295 367 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 KRT87PA6NCN2 255 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 PPP1R37O75864 691 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ERVK-10P10266 1014 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 CYP2F1P24903 491 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 SHMT1P34896 483 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 OAZ1P54368 228 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 MYL6P60660 151 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ERMARDQ5T6L9 678 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 VPS37AQ8NEZ2 397 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 VTA1Q9NP79 307 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TMEM39AQ9NV64 488 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 THG1LQ9NWX6 298 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 PCDHB5Q9Y5E4 795 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 SDR42E2A6NKP2 422 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 EVPLLA8MZ36 301 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 PQBP1O60828 265 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 ADORA2AP29274 412 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 AXLP30530 894 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 STIP1P31948 543 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 RENBPP51606 427 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ERVK-24P63145 666 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 MTM1Q13496 603 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 KYNUQ16719 465 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 KCNT1Q5JUK3 1230 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ZNF438Q7Z4V0 828 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TLK2Q86UE8 772 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 FAM83AQ86UY5 434 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 DTX3LQ8TDB6 740 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ANKS1AQ92625 1134 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 PHF21AQ96BD5 680 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 FAR2Q96K12 515 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 THTPAQ9BU02 230 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 SHCBP1LQ9BZQ2 653 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 KIAA1683Q9H0B3 1180 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 NT5MQ9NPB1 228 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TRIM49D1C9J1S8 452 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ANXA11P50995 505 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 ALDH6A1Q02252 535 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 DYNC1I2Q13409 638 aaKnown RBP9□□□□□ -0.97
PTCD3-201ENST00000254630 NLRP9Q7RTR0 991 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ZNF720Q7Z2F6 126 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 CCDC126Q96EE4 140 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ZNF333Q96JL9 665 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 CISHQ9NSE2 258 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TRPV2Q9Y5S1 764 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 V9GYQ6 96 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 ADGRB1O14514 1584 aa9□□□□□ -0.97
PTCD3-201ENST00000254630 TRIM66O15016 1216 aa8.99□□□□□ -0.97
PTCD3-201ENST00000254630 STRNO43815 780 aa8.99□□□□□ -0.97
PTCD3-201ENST00000254630 PSEN2P49810 448 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms