RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PARP14Q460N5 1801 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CUL9Q8IWT3 2517 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 DOCK6Q96HP0 2047 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 PRRG1O14668 218 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 ODC1P11926 461 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FECHP22830 423 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 ATP1A2P50993 1020 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 ITKQ08881 620 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 LINC01599Q8WXQ3 324 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 PLVAPQ9BX97 442 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 NRDE2Q9H7Z3 1164 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 VPS18Q9P253 973 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 SCINQ9Y6U3 715 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CABYRO75952 493 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 DESP17661 470 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 AMPD1P23109 780 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 AXLP30530 894 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CENPCQ03188 943 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CNGA2Q16280 664 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CASC4Q6P4E1 433 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CCDC89Q8N998 374 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FAM71DQ8N9W8 422 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 RSAD2Q8WXG1 361 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 BADQ92934 168 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 APOL2Q9BQE5 337 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 MLXIPLQ9NP71 852 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
LIN28A-201ENST00000254231 IP6K2Q9UHH9 426 aa12.19□□□□□ -0.46
LIN28A-201ENST00000254231 FRYLO94915 3013 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 ANO9A1A5B4 782 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 RFXAPO00287 272 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 ADAM12O43184 909 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 PROSCO94903 275 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 SLC11A1P49279 550 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 CCSAPQ6IQ19 270 aaPredicted RBP12.18□□□□□ -0.46
LIN28A-201ENST00000254231 XYLT1Q86Y38 959 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 FAM126BQ8IXS8 530 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 RNF139Q8WU17 664 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 RSPH1Q8WYR4 309 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 C9orf72Q96LT7 481 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 TBCBQ99426 244 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 NFKBIZQ9BYH8 718 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 PLEKHA5Q9HAU0 1116 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 CDH22Q9UJ99 828 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 PPME1Q9Y570 386 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 EP300Q09472 2414 aaPredicted RBP12.18□□□□□ -0.46
LIN28A-201ENST00000254231 KCNK1O00180 336 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 KRT14P02533 472 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 GPD1P21695 349 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 PGFP49763 221 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 CLUL1Q15846 466 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 ANKMY2Q8IV38 441 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 TP53INP2Q8IXH6 220 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 GLIS1Q8NBF1 620 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 CCDC26Q8TAB7 109 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 UVRAGQ9P2Y5 699 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
LIN28A-201ENST00000254231 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
LIN28A-201ENST00000254231 LRCH4O75427 683 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 HOXD8P13378 290 aaPredicted RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 SAT1P21673 171 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ATICP31939 592 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 DEUP1Q05D60 604 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 CALCOCO2Q13137 446 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 CBX2Q14781 532 aaPredicted RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 BTBD8Q5XKL5 378 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 NECAB2Q7Z6G3 386 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 NUP205Q92621 2012 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 DNM1LO00429 736 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 PIRO00625 290 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 TSPAN3O60637 253 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 LCA5LO95447 670 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ELF1P32519 619 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ACTN2P35609 894 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 KRT17Q04695 432 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 AP1B1Q10567 949 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 GPS1Q13098 491 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 UPP1Q16831 310 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 RTP2Q5QGT7 225 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 FAM35AQ86V20 835 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 SLC13A5Q86YT5 568 aaPredicted RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 SPATA18Q8TC71 538 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 SMG9Q9H0W8 520 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 WNT8AQ9H1J5 351 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ZDHHC4Q9NPG8 344 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 CYP1A1P04798 512 aaPredicted RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 NPR3P17342 541 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 VCPP55072 806 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 CLDN10P78369 228 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 BST2Q10589 180 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 C10orf120Q5SQS8 335 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ACTL9Q8TC94 416 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 CASKIN2Q8WXE0 1202 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms