RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NAA35Q5VZE5 725 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 GAREM2Q75VX8 874 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 BHLHA9Q7RTU4 235 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
VPS25-201ENST00000253794 ZDHHC17Q8IUH5 632 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 SPC24Q8NBT2 197 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 MSANTD4Q8NCY6 345 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 STKLD1Q8NE28 680 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 VCPIP1Q96JH7 1222 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 SLITRK1Q96PX8 696 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 CORO1BQ9BR76 489 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 MIS12Q9H081 205 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 HCFC1R1Q9NWW0 138 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 ZMYM5Q9UJ78 669 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 CLUHO75153 1309 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 COL6A3P12111 3177 aa14.85□□□□□ -0.03
VPS25-201ENST00000253794 C2orf16Q68DN1 1984 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 NOTCH4Q99466 2003 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 E5RJQ4 531 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ZNF197O14709 1029 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 PAPSS1O43252 624 aaPredicted RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 SART1O43290 800 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 MBTPS2O43462 519 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 PFKLP17858 780 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 EIF4A3P38919 411 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 CCR2P41597 374 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 NSFP46459 744 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 PSEN1P49768 467 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 RGS7P49802 495 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 DAOAP59103 153 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 ADIGQ0VDE8 80 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 TAF10Q12962 218 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 SKIV2LQ15477 1246 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 TAF12Q16514 161 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 SLC18A3Q16572 532 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 CYP4A22Q5TCH4 519 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 PDZD4Q76G19 769 aaPredicted RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 MON1BQ7L1V2 547 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 MON1AQ86VX9 555 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ERICH1Q86X53 443 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 TMEM139Q8IV31 216 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 HS6ST3Q8IZP7 471 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ARHGAP18Q8N392 663 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 IPO4Q8TEX9 1081 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ANP32BQ92688 251 aaKnown RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 FBXO32Q969P5 355 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 CHP1Q99653 195 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ISCUQ9H1K1 167 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 NHEJ1Q9H9Q4 299 aaPredicted RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 PIDD1Q9HB75 910 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ASNSD1Q9NWL6 643 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 CLIC5Q9NZA1 410 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 ADAMTS1Q9UHI8 967 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 USP15Q9Y4E8 981 aaPredicted RBP14.84□□□□□ -0.03
VPS25-201ENST00000253794 DENND4AQ7Z401 1863 aa14.84□□□□□ -0.03
VPS25-201ENST00000253794 A0A087X0T9 212 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 GRXCR2A6NFK2 248 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 H3BQ06 376 aaPredicted RBP14.83□□□□□ -0.04
VPS25-201ENST00000253794 RTN2O75298 545 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 LCA5LO95447 670 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 ERBB2P04626 1255 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 GLI1P08151 1106 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 FAM228BP0C875 321 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 DDX6P26196 483 aaKnown RBP eCLIP14.83□□□□□ -0.041e-6■■■□□ 15.9
VPS25-201ENST00000253794 GABRR2P28476 465 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 WEE1P30291 646 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 TUBP50607 506 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 MRPS5P82675 430 aaKnown RBP14.83□□□□□ -0.04
VPS25-201ENST00000253794 CBX2Q14781 532 aaPredicted RBP14.83□□□□□ -0.04
VPS25-201ENST00000253794 SLC5A9Q2M3M2 681 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 TMTC1Q8IUR5 882 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 CCDC170Q8IYT3 715 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 SHKBP1Q8TBC3 707 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 CPA5Q8WXQ8 436 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 C18orf8Q96DM3 657 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 MCRS1Q96EZ8 462 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 ULBP1Q9BZM6 244 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 ST7Q9NRC1 585 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 NAGPAQ9UK23 515 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 STRIP2Q9ULQ0 834 aa14.83□□□□□ -0.04
VPS25-201ENST00000253794 MAGED2Q9UNF1 606 aaPredicted RBP14.83□□□□□ -0.04
VPS25-201ENST00000253794 MYH10P35580 1976 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 ZNF840PA6NDX5 716 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 NRG2O14511 850 aaPredicted RBP14.82□□□□□ -0.04
VPS25-201ENST00000253794 OLFM2O95897 454 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 CALB1P05937 261 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 USP17L7P0C7H9 530 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 FSHRP23945 695 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 NTHL1P78549 312 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 ZNF268Q14587 947 aaPredicted RBP14.82□□□□□ -0.04
VPS25-201ENST00000253794 SMAD2Q15796 467 aaKnown RBP14.82□□□□□ -0.04
VPS25-201ENST00000253794 OLFML1Q6UWY5 402 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 EP400NLQ6ZTU2 488 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 SLC26A9Q7LBE3 791 aa14.82□□□□□ -0.04
VPS25-201ENST00000253794 ARCQ7LC44 396 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms