RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 ZNF558Q96NG5 402 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SYT15Q9BQS2 421 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 IL1RL2Q9HB29 575 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 RRAGDQ9NQL2 400 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SOHLH2Q9NX45 425 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 TRPC4Q9UBN4 977 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 A0A088AWK7 358 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 AGRPO00253 132 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 RTN3O95197 1032 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ZNF10P21506 573 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 PGM1P36871 562 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 PABPC1LQ4VXU2 614 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DOK6Q6PKX4 331 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 LVRNQ6Q4G3 990 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ADCK1Q86TW2 530 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SIRT2Q8IXJ6 389 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CDK20Q8IZL9 346 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 B3GALNT2Q8NCR0 500 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CMTM5Q96DZ9 223 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 UBE2OQ9C0C9 1292 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 RANBP17Q9H2T7 1088 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 AASDHPPTQ9NRN7 309 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CDY2AQ9Y6F7 541 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 TRPC5OSA6NMA1 111 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SUPT7LO94864 414 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 IFNA14P01570 189 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ADORA2AP29274 412 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SP3Q02447 781 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 CREMQ03060 361 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 IYDQ6PHW0 289 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 ABCG4Q9H172 646 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 SAE1Q9UBE0 346 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 USP18Q9UMW8 372 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 DRG1Q9Y295 367 aaKnown RBP10.91□□□□□ -0.66
TRPS1-201ENST00000220888 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
TRPS1-201ENST00000220888 GMNCA6NCL1 334 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 GYS1P13807 737 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 PPP2R1BP30154 601 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ORC1Q13415 861 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TRIP4Q15650 581 aaPredicted RBP10.9□□□□□ -0.66
TRPS1-201ENST00000220888 EPC2Q52LR7 807 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 FBXL19Q6PCT2 694 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 NT5DC3Q86UY8 548 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 FIBCD1Q8N539 461 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 LPCAT1Q8NF37 534 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 SERAC1Q96JX3 654 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 KCNK16Q96T55 309 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ATP13A1Q9HD20 1204 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 NT5MQ9NPB1 228 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
TRPS1-201ENST00000220888 MARCOQ9UEW3 520 aaPredicted RBP10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TUBGCP4Q9UGJ1 667 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TRPV2Q9Y5S1 764 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ZNF839A8K0R7 811 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 PLA2G6O60733 806 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 CDH16O75309 829 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 CYP2A7P20853 494 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 CCR1P32246 355 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 PSEN2P49810 448 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TBX4P57082 545 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 NOGQ13253 232 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 CYP51A1Q16850 503 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.66
TRPS1-201ENST00000220888 C3orf62Q6ZUJ4 267 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 RFX8Q6ZV50 586 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TXNRD3Q86VQ6 643 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ELOA2Q8IYF1 753 aaPredicted RBP10.9□□□□□ -0.66
TRPS1-201ENST00000220888 KAT2BQ92831 832 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 CASP10Q92851 521 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 C9orf72Q96LT7 481 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 MSH4O15457 936 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TKTL1P51854 596 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ZNF655Q8N720 491 aaPredicted RBP10.9□□□□□ -0.66
TRPS1-201ENST00000220888 TUBGCP3Q96CW5 907 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 MAP3K14Q99558 947 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 FAM167BQ9BTA0 163 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ELOVL6Q9H5J4 265 aa10.9□□□□□ -0.66
TRPS1-201ENST00000220888 ADM5C9JUS6 153 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 EIF2S1P05198 315 aaKnown RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 GSTM1P09488 218 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 CLTBP09497 229 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 INSRRP14616 1297 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 ALDH9A1P49189 494 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 VSNL1P62760 191 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 ITGA9Q13797 1035 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 LRRC23Q53EV4 343 aaPredicted RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 ATAD3BQ5T9A4 648 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 SHC4Q6S5L8 630 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 DENND5BQ6ZUT9 1274 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 OTOAQ7RTW8 1153 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 SETD3Q86TU7 594 aaPredicted RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 MAGED4Q96JG8 741 aa10.9□□□□□ -0.67
TRPS1-201ENST00000220888 SMAD5Q99717 465 aaKnown RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 SPATS2LQ9NUQ6 558 aaKnown RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 FBXO2Q9UK22 296 aaPredicted RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 MRPS23Q9Y3D9 190 aaKnown RBP10.9□□□□□ -0.67
TRPS1-201ENST00000220888 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms