RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ENPEPQ07075 957 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 ZNF699Q32M78 642 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 FOXD4L6Q3SYB3 417 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-201ENST00000013807 PLK5Q496M5 336 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 RHBDF2Q6PJF5 856 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 FOXD4L3Q6VB84 417 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-201ENST00000013807 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 UNC93AQ86WB7 457 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 RASSF3Q86WH2 238 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 FUKQ8N0W3 1084 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 ZFRQ96KR1 1074 aaKnown RBP16.86■□□□□ 0.29
ERCC1-201ENST00000013807 KCNK16Q96T55 309 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 DUSP15Q9H1R2 295 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-201ENST00000013807 SMYD3Q9H7B4 428 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 EXOC1Q9NV70 894 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 TBC1D14Q9P2M4 693 aa16.86■□□□□ 0.29
ERCC1-201ENST00000013807 TNRC6BQ9UPQ9 1833 aaKnown RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 GDF9O60383 454 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 ASS1P00966 412 aaKnown RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 CCDC192P0DO97 292 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 PFKFB1P16118 471 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 DLG4P78352 724 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 MRPS21P82921 87 aaKnown RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 BIRC3Q13489 604 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 DHCR24Q15392 516 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 HSF5Q4G112 596 aaPredicted RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 C1orf220Q5T0J3 134 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 FAM35AQ86V20 835 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 DDX1Q92499 740 aaKnown RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 SMARCD1Q96GM5 515 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 HHIPQ96QV1 700 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 SDCBP2Q9H190 292 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 ARRDC1-AS1Q9H2J1 176 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 DMAP1Q9NPF5 467 aaPredicted RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 POLR3BQ9NW08 1133 aaPredicted RBP16.85■□□□□ 0.29
ERCC1-201ENST00000013807 ATP8B3O60423 1300 aa16.85■□□□□ 0.29
ERCC1-201ENST00000013807 A0A1B0GVL5 298 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 COCHO43405 550 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 RHOBTB3O94955 611 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 NR3C1P04150 777 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 ADRB1P08588 477 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 P4HA1P13674 534 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 SV2AQ7L0J3 742 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 ZMIZ2Q8NF64 920 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 SCAMP5Q8TAC9 235 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 FBXO32Q969P5 355 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 MMP17Q9ULZ9 603 aa16.84■□□□□ 0.29
ERCC1-201ENST00000013807 MAP1BP46821 2468 aaKnown RBP16.84■□□□□ 0.29
ERCC1-201ENST00000013807 SLC5A3P53794 718 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 INCA1Q0VD86 236 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 CRY1Q16526 586 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 ACOT1Q86TX2 421 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 C11orf74Q86VG3 221 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 PHTF2Q8N3S3 785 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 TTC16Q8NEE8 873 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 KCNV2Q8TDN2 545 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 CNOT6LQ96LI5 555 aaKnown RBP16.83■□□□□ 0.28
ERCC1-201ENST00000013807 PNKPQ96T60 521 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 VPS45Q9NRW7 570 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 CFAP97Q9P2B7 532 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 CHORDC1Q9UHD1 332 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-201ENST00000013807 ZDHHC9Q9Y397 364 aa16.83■□□□□ 0.28
ERCC1-201ENST00000013807 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-201ENST00000013807 CALUO43852 315 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-201ENST00000013807 RHOBTB1O94844 696 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 KIF20AO95235 890 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 ADH1CP00326 375 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 ABL1P00519 1130 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 MBL2P11226 248 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-201ENST00000013807 TNFRSF4P43489 277 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 DGKEP52429 567 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 NDST1P52848 882 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 ETFBKMTQ8IXQ9 262 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 OLIG1Q8TAK6 271 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 SMOQ99835 787 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 FBXO44Q9H4M3 255 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 SMPD4Q9NXE4 827 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
ERCC1-201ENST00000013807 PCNX2A6NKB5 2137 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 BCLAF3A2AJT9 711 aaKnown RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 AP1G2O75843 785 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 BEST1O76090 585 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 KAT7O95251 611 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 MPLP40238 635 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 GRIA2P42262 883 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 KIR2DL1P43626 348 aaPredicted RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 ASPAP45381 313 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 SLC6A11P48066 632 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 KRT85P78386 507 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 DPYDQ12882 1025 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 SF3A2Q15428 464 aaKnown RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 ELF2Q15723 593 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 USP39Q53GS9 565 aaKnown RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 C2orf27AQ580R0 203 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 ZNF276Q8N554 614 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 IL17RCQ8NAC3 791 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 TSTD1Q8NFU3 115 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms