RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Rhobtb2Q91V93 728 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ddx50Q99MJ9 734 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cmtm6Q9CZ69 183 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ern1Q9EQY0 977 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Dkc1Q9ESX5 509 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 AdssP46664 456 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Arid5aQ3U108 590 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Usf2Q64705 346 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 FAM120AQ6A0A9 1112 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Capn11Q6J756 714 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Magee1Q6PCZ4 918 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tas2r109Q7M707 316 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 DolkQ8R2Y3 534 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mei1Q9D4I2 1268 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tysnd1Q9DBA6 568 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Copg2Q9QXK3 871 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 CtsfQ9R013 462 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ptprn2P80560 1001 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Sel1l2Q3V172 688 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 KdsrQ6GV12 332 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Oxsr1Q6P9R2 527 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pdk1Q8BFP9 434 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Msantd1Q8BIL2 278 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc38a7Q8BWH0 463 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc9b1Q8C0X2 565 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Fndc5Q8K4Z2 209 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tmcc3Q8R310 477 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cdk8Q8R3L8 464 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Eif2ak3Q9Z2B5 1114 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rhox13F6YCR7 232 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Sptlc1O35704 473 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 LtkP08923 888 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pla2g4bP0C871 782 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Alox12P39655 663 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm5431Q5NCB3 844 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cd180Q62192 661 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Senp6Q6P7W0 1132 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Unc5clQ6R653 518 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Fig4Q91WF7 907 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 9230104L09RikQ9D264 133 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Fhod3Q76LL6 1578 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Myo10F8VQB6 2062 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pgbd1E9Q492 415 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ApoeP08226 311 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 AcadlP51174 430 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Q8BGD0 127 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Slc35c2Q8VCX2 364 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ciao1Q99KN2 339 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ppp1r3aQ99MR9 1089 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Jph2Q9ET78 696 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Map3k6Q9WTR2 1291 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm28036V9GXJ1 658 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Abcc2Q8VI47 1543 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tbc1d25A1A5B6 742 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tmem45a2B7ZWJ5 289 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pde8bE9Q4S1 865 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Olfr521E9Q519 321 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 H2-AaP01910 256 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cd22P35329 862 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Eif4a1P60843 406 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Fgfr4Q03142 799 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ssxb5Q6XAS2 159 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Dcaf6Q9DC22 876 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gli2Q0VGT2 1544 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Hsf3D0VYS2 492 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Akr1c6P70694 323 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ag2Q3UPL5 249 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rnpc3Q3UZ01 514 aaKnown RBP9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Scgb2b2Q6UGQ3 114 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Pcmtd2Q8BHD8 359 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Tmc7Q8C428 726 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ClyblQ8R4N0 338 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Cdyl2Q9D5D8 503 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gtf2h1Q9DBA9 547 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Dlc1Q9R0Z9 1092 aa9.62□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Kif14L0N7N1 1674 aaKnown RBP9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Ccdc163A2AGD7 326 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ZfrO88532 1074 aaKnown RBP9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Crabp2P22935 138 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 FancbQ5XJY6 703 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mis18bp1Q80WQ8 998 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Hyal5Q812F3 526 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Adgra1Q8C4G9 578 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Q8CIL4 281 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Far1Q922J9 515 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Alpk1Q9CXB8 1231 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Mid2Q9QUS6 705 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Acot3Q9QYR7 432 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 ArcQ9WV31 396 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rims1Q99NE5 1463 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Oas1eA0A0J9YV76 386 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rad51Q08297 339 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 GzmnQ920S1 248 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Fam49bQ921M7 324 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Myh13B1AR69 1938 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Rreb1Q3UH06 1700 aaKnown RBP9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm8113E0CXS8 587 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm16440K7N6G6 218 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 Gm8271L7N2E2 218 aa9.61□□□□□ -0.87
Col6a5-201ENSMUST00000165165 H2-M9O19442 342 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms