RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C BRP1P53194 125 aa4.5□□□□□ -1.69
TSR3YOR006C MRPL31P14063 131 aaPredicted RBP4.49□□□□□ -1.69
TSR3YOR006C KRE1P17260 313 aa4.49□□□□□ -1.69
TSR3YOR006C PAM17P36147 197 aa4.49□□□□□ -1.69
TSR3YOR006C MRPS9P38120 278 aa4.49□□□□□ -1.69
TSR3YOR006C YBL081WP38180 368 aaKnown RBP4.49□□□□□ -1.69
TSR3YOR006C GAT4P40569 121 aa4.49□□□□□ -1.69
TSR3YOR006C SPG1P50088 95 aa4.49□□□□□ -1.69
TSR3YOR006C SDS23P53172 527 aa4.49□□□□□ -1.69
TSR3YOR006C KSH1Q8TGJ3 72 aa4.49□□□□□ -1.69
TSR3YOR006C ENV10Q99382 181 aa4.49□□□□□ -1.69
TSR3YOR006C MDN1Q12019 4910 aaKnown RBP4.49□□□□□ -1.69
TSR3YOR006C YCR050CP25630 102 aa4.48□□□□□ -1.69
TSR3YOR006C RPA12P32529 125 aaKnown RBP4.48□□□□□ -1.69
TSR3YOR006C YNL217WP40152 326 aa4.48□□□□□ -1.69
TSR3YOR006C PAU15P40585 124 aa4.48□□□□□ -1.69
TSR3YOR006C SKI6P46948 246 aaPredicted RBP4.48□□□□□ -1.69
TSR3YOR006C YGL193CP53097 103 aa4.48□□□□□ -1.69
TSR3YOR006C YML079WQ03629 201 aa4.48□□□□□ -1.69
TSR3YOR006C DFM1Q12743 341 aaKnown RBP4.48□□□□□ -1.69
TSR3YOR006C YHL018WP38744 120 aaPredicted RBP4.47□□□□□ -1.69
TSR3YOR006C YER134CP40081 178 aa4.47□□□□□ -1.69
TSR3YOR006C UBC4P15731 148 aa4.46□□□□□ -1.7
TSR3YOR006C MID2P36027 376 aa4.46□□□□□ -1.7
TSR3YOR006C PAU7P39545 55 aa4.46□□□□□ -1.7
TSR3YOR006C PAU5P43575 122 aa4.46□□□□□ -1.7
TSR3YOR006C SPC1P46965 94 aa4.46□□□□□ -1.7
TSR3YOR006C RSM19P53733 91 aaPredicted RBP4.46□□□□□ -1.7
TSR3YOR006C TOM6P33448 61 aa4.45□□□□□ -1.7
TSR3YOR006C SVP26P38869 228 aa4.45□□□□□ -1.7
TSR3YOR006C YFL067WP43537 175 aa4.45□□□□□ -1.7
TSR3YOR006C KNH1P50112 268 aa4.45□□□□□ -1.7
TSR3YOR006C SMD1Q02260 146 aaPredicted RBP4.45□□□□□ -1.7
TSR3YOR006C GPI19Q04082 140 aa4.45□□□□□ -1.7
TSR3YOR006C YLR363W-AQ3E747 85 aa4.45□□□□□ -1.7
TSR3YOR006C PAU19P0CE85 124 aa4.44□□□□□ -1.7
TSR3YOR006C PAU21P0CE86 164 aa4.44□□□□□ -1.7
TSR3YOR006C PAU22P0CE87 164 aa4.44□□□□□ -1.7
TSR3YOR006C PAU3P25610 124 aa4.44□□□□□ -1.7
TSR3YOR006C SMP1P38128 452 aa4.44□□□□□ -1.7
TSR3YOR006C YNL198CP40166 100 aa4.44□□□□□ -1.7
TSR3YOR006C YER078W-AQ3E7A2 54 aa4.44□□□□□ -1.7
TSR3YOR006C YPL229WQ99395 206 aa4.44□□□□□ -1.7
TSR3YOR006C TDA2P40045 126 aa4.43□□□□□ -1.7
TSR3YOR006C PMP3P87284 55 aa4.43□□□□□ -1.7
TSR3YOR006C YIL102C-AQ2V2P5 75 aa4.43□□□□□ -1.7
TSR3YOR006C POP3P53833 195 aaPredicted RBP4.42□□□□□ -1.7
TSR3YOR006C ERI1P62651 68 aaKnown RBP4.42□□□□□ -1.7
TSR3YOR006C HHF1P02309 103 aaKnown RBP4.41□□□□□ -1.7
TSR3YOR006C YJL028WP47062 111 aa4.41□□□□□ -1.7
TSR3YOR006C YDL157CQ12082 118 aa4.41□□□□□ -1.7
TSR3YOR006C EMC6Q12431 108 aa4.41□□□□□ -1.7
TSR3YOR006C RTC6O14464 93 aa4.4□□□□□ -1.71
TSR3YOR006C RPL16AP26784 199 aaKnown RBP4.4□□□□□ -1.71
TSR3YOR006C NHP2P32495 156 aaPredicted RBP4.4□□□□□ -1.71
TSR3YOR006C YNL200CP40165 246 aaKnown RBP4.4□□□□□ -1.71
TSR3YOR006C PBA1Q05778 276 aa4.4□□□□□ -1.71
TSR3YOR006C RPL23AP0CX41 137 aaKnown RBP4.39□□□□□ -1.71
TSR3YOR006C RPL23BP0CX42 137 aaKnown RBP4.39□□□□□ -1.71
TSR3YOR006C BET1P22804 142 aa4.39□□□□□ -1.71
TSR3YOR006C YPR195CQ06594 109 aa4.39□□□□□ -1.71
TSR3YOR006C YFL041W-AQ3E817 63 aa4.39□□□□□ -1.71
TSR3YOR006C TDA8Q6B2U8 126 aa4.39□□□□□ -1.71
TSR3YOR006C YPR010C-AA5Z2X5 72 aa4.38□□□□□ -1.71
TSR3YOR006C PAU16P35994 123 aa4.38□□□□□ -1.71
TSR3YOR006C DCV1P43595 202 aa4.38□□□□□ -1.71
TSR3YOR006C YDR119W-AQ2V2P9 66 aa4.38□□□□□ -1.71
TSR3YOR006C YMR122W-AQ3E842 84 aa4.38□□□□□ -1.71
TSR3YOR006C SCS22Q6Q595 175 aa4.38□□□□□ -1.71
TSR3YOR006C MIC10Q96VH5 97 aa4.38□□□□□ -1.71
TSR3YOR006C DDR48P18899 430 aaKnown RBP4.37□□□□□ -1.71
TSR3YOR006C EDC2P40023 145 aaPredicted RBP4.37□□□□□ -1.71
TSR3YOR006C YLR296WQ05898 108 aa4.37□□□□□ -1.71
TSR3YOR006C YBL008W-AQ3E821 79 aa4.37□□□□□ -1.71
TSR3YOR006C YLL066W-BQ8TGJ7 56 aa4.37□□□□□ -1.71
TSR3YOR006C RPL33AP05744 107 aaKnown RBP4.36□□□□□ -1.71
TSR3YOR006C YKR032WP36127 104 aa4.36□□□□□ -1.71
TSR3YOR006C YHL042WP38729 150 aa4.36□□□□□ -1.71
TSR3YOR006C ARC15P40518 154 aaRIP-Chip data4.36□□□□□ -1.71not detected
TSR3YOR006C RPL33BP41056 107 aaKnown RBP4.36□□□□□ -1.71
TSR3YOR006C YDR042CQ03205 200 aa4.36□□□□□ -1.71
TSR3YOR006C RPS22BQ3E7Y3 130 aaKnown RBP4.36□□□□□ -1.71
TSR3YOR006C YOR376W-AQ3E805 51 aa4.36□□□□□ -1.71
TSR3YOR006C YOR020W-AQ3E824 90 aa4.36□□□□□ -1.71
TSR3YOR006C FYV4P38783 130 aaPredicted RBP4.35□□□□□ -1.71
TSR3YOR006C PET8P38921 284 aa4.35□□□□□ -1.71
TSR3YOR006C YML100W-AQ8TGT0 57 aa4.35□□□□□ -1.71
TSR3YOR006C YBR209WP38311 105 aa4.34□□□□□ -1.71
TSR3YOR006C YAL064WP39711 94 aa4.34□□□□□ -1.71
TSR3YOR006C YFL019CP43576 117 aa4.34□□□□□ -1.71
TSR3YOR006C HUR1P45820 110 aa4.34□□□□□ -1.71
TSR3YOR006C YFR032C-BQ8TGU2 87 aa4.34□□□□□ -1.71
TSR3YOR006C YHR139C-AO13536 103 aa4.33□□□□□ -1.72
TSR3YOR006C YMR295CQ03559 197 aa4.33□□□□□ -1.72
TSR3YOR006C YKL044WP36092 106 aa4.32□□□□□ -1.72
TSR3YOR006C HPA2Q06592 156 aa4.32□□□□□ -1.72
TSR3YOR006C YOL014WQ08110 124 aa4.32□□□□□ -1.72
TSR3YOR006C YMR175W-AQ3E766 64 aa4.32□□□□□ -1.72
TSR3YOR006C YAL063C-AQ3E791 96 aa4.32□□□□□ -1.72
TSR3YOR006C YPL038W-AQ3E7B4 63 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms