RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W YFL019CP43576 117 aa3.39□□□□□ -1.87
TIM54YJL054W EOS1P53938 366 aa3.39□□□□□ -1.87
TIM54YJL054W AIM11P87275 137 aa3.39□□□□□ -1.87
TIM54YJL054W ADH1P00330 348 aaKnown RBP3.38□□□□□ -1.87
TIM54YJL054W QCR8P08525 94 aa3.38□□□□□ -1.87
TIM54YJL054W YBL039W-BP0C268 59 aa3.38□□□□□ -1.87
TIM54YJL054W PEX17P40155 199 aa3.38□□□□□ -1.87
TIM54YJL054W YGL193CP53097 103 aa3.38□□□□□ -1.87
TIM54YJL054W MBF1O14467 151 aaKnown RBP3.37□□□□□ -1.87
TIM54YJL054W YGL149WP53116 101 aa3.37□□□□□ -1.87
TIM54YJL054W RPL18AP0CX49 186 aaKnown RBP3.36□□□□□ -1.87
TIM54YJL054W RPL18BP0CX50 186 aaKnown RBP3.36□□□□□ -1.87
TIM54YJL054W IGD1P43598 195 aa3.36□□□□□ -1.87
TIM54YJL054W ARL3Q02804 198 aa3.36□□□□□ -1.87
TIM54YJL054W ATP16Q12165 160 aa3.36□□□□□ -1.87
TIM54YJL054W YDL022C-AP0C5L6 82 aa3.36□□□□□ -1.87
TIM54YJL054W FYV4P38783 130 aaPredicted RBP3.36□□□□□ -1.87
TIM54YJL054W YPL261CQ08976 102 aa3.36□□□□□ -1.87
TIM54YJL054W KNH1P50112 268 aa3.35□□□□□ -1.87
TIM54YJL054W RPL29P05747 59 aaPredicted RBP3.34□□□□□ -1.88
TIM54YJL054W YLR156WP0CE96 114 aa3.34□□□□□ -1.88
TIM54YJL054W YLR159WP0CE97 114 aa3.34□□□□□ -1.88
TIM54YJL054W YLR161WP0CE98 114 aa3.34□□□□□ -1.88
TIM54YJL054W HAP3P13434 144 aa3.34□□□□□ -1.88
TIM54YJL054W ARO2P28777 376 aaKnown RBP3.34□□□□□ -1.88
TIM54YJL054W YKR041WP36134 250 aa3.34□□□□□ -1.88
TIM54YJL054W YML079WQ03629 201 aa3.34□□□□□ -1.88
TIM54YJL054W YKL023C-AQ2V2P3 75 aa3.34□□□□□ -1.88
TIM54YJL054W MRPS12P53732 153 aa3.33□□□□□ -1.88
TIM54YJL054W YLR050CQ12155 161 aaKnown RBP3.33□□□□□ -1.88
TIM54YJL054W YLL006W-AQ3E814 58 aa3.33□□□□□ -1.88
TIM54YJL054W YER039C-AP0CD97 72 aa3.32□□□□□ -1.88
TIM54YJL054W UBC4P15731 148 aa3.32□□□□□ -1.88
TIM54YJL054W YOR268CQ08734 132 aa3.32□□□□□ -1.88
TIM54YJL054W SCM4P32564 187 aa3.31□□□□□ -1.88
TIM54YJL054W EDC2P40023 145 aaPredicted RBP3.31□□□□□ -1.88
TIM54YJL054W YER078W-AQ3E7A2 54 aa3.31□□□□□ -1.88
TIM54YJL054W RPL28P02406 149 aaKnown RBP3.3□□□□□ -1.88
TIM54YJL054W CNL1Q06333 122 aa3.3□□□□□ -1.88
TIM54YJL054W HPA2Q06592 156 aa3.3□□□□□ -1.88
TIM54YJL054W KTI11Q3E840 82 aa3.3□□□□□ -1.88
TIM54YJL054W CUE4Q04201 117 aaPredicted RBP3.29□□□□□ -1.88
TIM54YJL054W UGX2P32772 223 aa3.28□□□□□ -1.88
TIM54YJL054W YKL044WP36092 106 aa3.28□□□□□ -1.88
TIM54YJL054W SPG1P50088 95 aa3.28□□□□□ -1.88
TIM54YJL054W YNL190WP53872 204 aa3.28□□□□□ -1.88
TIM54YJL054W YGR121W-AQ3E816 71 aa3.28□□□□□ -1.88
TIM54YJL054W IGO2Q9P305 131 aa3.28□□□□□ -1.88
TIM54YJL054W MRPL11P36521 249 aaPredicted RBP3.27□□□□□ -1.89
TIM54YJL054W YEL067CP39978 195 aa3.27□□□□□ -1.89
TIM54YJL054W DDR2P89113 61 aa3.27□□□□□ -1.89
TIM54YJL054W SCS22Q6Q595 175 aa3.27□□□□□ -1.89
TIM54YJL054W HHF1P02309 103 aaKnown RBP3.27□□□□□ -1.89
TIM54YJL054W YPL073CP40323 161 aa3.27□□□□□ -1.89
TIM54YJL054W YJR085CP47131 105 aaKnown RBP3.27□□□□□ -1.89
TIM54YJL054W YPL257WQ08974 193 aa3.27□□□□□ -1.89
TIM54YJL054W CMC4Q3E7A9 73 aa3.27□□□□□ -1.89
TIM54YJL054W YNL042W-BQ3E7Z2 85 aa3.27□□□□□ -1.89
TIM54YJL054W RPL26AP05743 127 aaKnown RBP3.26□□□□□ -1.89
TIM54YJL054W ATP5P09457 212 aa3.26□□□□□ -1.89
TIM54YJL054W SEC11P15367 167 aa3.26□□□□□ -1.89
TIM54YJL054W MRPL44P19956 98 aa3.26□□□□□ -1.89
TIM54YJL054W SPT4P32914 102 aaPredicted RBP3.26□□□□□ -1.89
TIM54YJL054W RPL26BP53221 127 aaKnown RBP3.26□□□□□ -1.89
TIM54YJL054W YNR077CP53758 84 aa3.26□□□□□ -1.89
TIM54YJL054W YOR020W-AQ3E824 90 aa3.26□□□□□ -1.89
TIM54YJL054W KSH1Q8TGJ3 72 aa3.26□□□□□ -1.89
TIM54YJL054W SSS1P35179 80 aa3.25□□□□□ -1.89
TIM54YJL054W KRE1P17260 313 aa3.24□□□□□ -1.89
TIM54YJL054W COX10P21592 462 aa3.24□□□□□ -1.89
TIM54YJL054W RGM1Q00453 211 aa3.24□□□□□ -1.89
TIM54YJL054W YML108WQ03759 105 aa3.24□□□□□ -1.89
TIM54YJL054W PAU17Q12370 124 aa3.24□□□□□ -1.89
TIM54YJL054W YIL134C-AQ45U18 67 aa3.24□□□□□ -1.89
TIM54YJL054W YIA6P40556 373 aa3.23□□□□□ -1.89
TIM54YJL054W YGL230CP53074 147 aa3.23□□□□□ -1.89
TIM54YJL054W ICY1Q04329 127 aa3.23□□□□□ -1.89
TIM54YJL054W IRC21Q04772 201 aa3.23□□□□□ -1.89
TIM54YJL054W COA6Q3E846 104 aa3.23□□□□□ -1.89
TIM54YJL054W MSL1P40567 111 aaPredicted RBP3.22□□□□□ -1.89
TIM54YJL054W SEN15Q04675 128 aa3.22□□□□□ -1.89
TIM54YJL054W YBR230W-AQ3E762 66 aa3.22□□□□□ -1.89
TIM54YJL054W YJL127C-BQ3E828 52 aa3.22□□□□□ -1.89
TIM54YJL054W MID2P36027 376 aa3.21□□□□□ -1.9
TIM54YJL054W MRPL24P36525 258 aaPredicted RBP3.21□□□□□ -1.9
TIM54YJL054W YFR057WP43625 151 aa3.21□□□□□ -1.9
TIM54YJL054W FYV5P25585 152 aa3.2□□□□□ -1.9
TIM54YJL054W YLR236CA0A023PZG4 107 aa3.19□□□□□ -1.9
TIM54YJL054W YEL045CP32616 141 aa3.19□□□□□ -1.9
TIM54YJL054W BSC4P53841 131 aa3.19□□□□□ -1.9
TIM54YJL054W YDL157CQ12082 118 aa3.19□□□□□ -1.9
TIM54YJL054W CGR1P53188 120 aa3.18□□□□□ -1.9
TIM54YJL054W TIM11P81449 96 aaPredicted RBP3.18□□□□□ -1.9
TIM54YJL054W YHR007C-AQ07074 71 aa3.18□□□□□ -1.9
TIM54YJL054W YOR072WQ08486 104 aa3.17□□□□□ -1.9
TIM54YJL054W YBR027CP38220 110 aa3.16□□□□□ -1.9
TIM54YJL054W YHR130CP38834 111 aa3.16□□□□□ -1.9
TIM54YJL054W PAU23Q07987 124 aa3.15□□□□□ -1.91
TIM54YJL054W BET1P22804 142 aa3.14□□□□□ -1.91
TIM54YJL054W SFT1P43682 97 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms