RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W YMR321CQ04898 105 aa0.77□□□□□ -2.29
MSN5YDR335W COX23P38824 151 aa0.76□□□□□ -2.29
MSN5YDR335W DSE2P38844 325 aa0.76□□□□□ -2.29
MSN5YDR335W VPS55P47111 140 aa0.76□□□□□ -2.29
MSN5YDR335W YOR343CQ12484 108 aa0.76□□□□□ -2.29
MSN5YDR335W YLR363W-AQ3E747 85 aa0.76□□□□□ -2.29
MSN5YDR335W RPL36BO14455 100 aaKnown RBP0.76□□□□□ -2.29
MSN5YDR335W RPL36AP05745 100 aaPredicted RBP0.76□□□□□ -2.29
MSN5YDR335W MRPL38P35996 138 aaPredicted RBP0.76□□□□□ -2.29
MSN5YDR335W DAN1P47178 298 aa0.76□□□□□ -2.29
MSN5YDR335W YHR213W-AQ8TGT4 77 aa0.76□□□□□ -2.29
MSN5YDR335W YGL014C-AP0C5N1 53 aa0.76□□□□□ -2.29
MSN5YDR335W RSM18P40033 138 aa0.76□□□□□ -2.29
MSN5YDR335W COX12Q01519 83 aa0.76□□□□□ -2.29
MSN5YDR335W RPL33AP05744 107 aaKnown RBP0.75□□□□□ -2.29
MSN5YDR335W PAU24P38155 120 aa0.75□□□□□ -2.29
MSN5YDR335W FAS1P07149 2051 aaKnown RBP0.75□□□□□ -2.29
MSN5YDR335W MAK31P23059 88 aa0.75□□□□□ -2.29
MSN5YDR335W SNN1P48232 102 aa0.75□□□□□ -2.29
MSN5YDR335W YMR122CQ03879 124 aa0.75□□□□□ -2.29
MSN5YDR335W HRT1Q08273 121 aa0.75□□□□□ -2.29
MSN5YDR335W NUM1Q00402 2748 aa0.75□□□□□ -2.29
MSN5YDR335W YJL009WP47078 108 aa0.75□□□□□ -2.29
MSN5YDR335W EMC6Q12431 108 aa0.75□□□□□ -2.29
MSN5YDR335W PAU19P0CE85 124 aa0.74□□□□□ -2.29
MSN5YDR335W PAU3P25610 124 aa0.74□□□□□ -2.29
MSN5YDR335W DAD4P69851 72 aa0.74□□□□□ -2.29
MSN5YDR335W YNL146C-AQ3E7Z1 64 aa0.74□□□□□ -2.29
MSN5YDR335W YGR121W-AQ3E816 71 aa0.74□□□□□ -2.29
MSN5YDR335W PCC1Q3E833 88 aa0.74□□□□□ -2.29
MSN5YDR335W TEL1P38110 2787 aa0.74□□□□□ -2.29
MSN5YDR335W RPL43AP0CX25 92 aaKnown RBP0.74□□□□□ -2.29
MSN5YDR335W RPL43BP0CX26 92 aa0.74□□□□□ -2.29
MSN5YDR335W PAU16P35994 123 aa0.74□□□□□ -2.29
MSN5YDR335W PAU15P40585 124 aa0.74□□□□□ -2.29
MSN5YDR335W COX19Q3E731 98 aa0.74□□□□□ -2.29
MSN5YDR335W TAR1Q8TGM6 124 aa0.74□□□□□ -2.29
MSN5YDR335W YAL065CO13511 128 aa0.74□□□□□ -2.29
MSN5YDR335W RPL22AP05749 121 aaKnown RBP0.74□□□□□ -2.29
MSN5YDR335W YHR214C-DP0CX93 97 aa0.74□□□□□ -2.29
MSN5YDR335W ROX3P25046 220 aa0.74□□□□□ -2.29
MSN5YDR335W YEL008WP40001 126 aa0.74□□□□□ -2.29
MSN5YDR335W YLR194CQ05777 254 aa0.74□□□□□ -2.29
MSN5YDR335W COA4Q05809 96 aa0.74□□□□□ -2.29
MSN5YDR335W YIL163CP40448 117 aa0.73□□□□□ -2.29
MSN5YDR335W MRX7P53869 86 aa0.73□□□□□ -2.29
MSN5YDR335W SEN15Q04675 128 aa0.73□□□□□ -2.29
MSN5YDR335W YFL065CP43539 102 aa0.73□□□□□ -2.29
MSN5YDR335W YGL149WP53116 101 aa0.73□□□□□ -2.29
MSN5YDR335W YLR162WQ06235 118 aa0.73□□□□□ -2.29
MSN5YDR335W YPR203WQ08994 102 aa0.73□□□□□ -2.29
MSN5YDR335W YOR314WQ12506 109 aa0.73□□□□□ -2.29
MSN5YDR335W YDR381C-AQ3E6R5 114 aa0.73□□□□□ -2.29
MSN5YDR335W YPL038W-AQ3E7B4 63 aa0.73□□□□□ -2.29
MSN5YDR335W RPS11AP0CX47 156 aaKnown RBP0.73□□□□□ -2.29
MSN5YDR335W RPS11BP0CX48 156 aaKnown RBP0.73□□□□□ -2.29
MSN5YDR335W MRP17P28778 131 aa0.73□□□□□ -2.29
MSN5YDR335W MIC27P50945 234 aa0.73□□□□□ -2.29
MSN5YDR335W SUS1Q6WNK7 96 aa0.73□□□□□ -2.29
MSN5YDR335W MRPS12P53732 153 aa0.72□□□□□ -2.29
MSN5YDR335W IRC21Q04772 201 aa0.72□□□□□ -2.29
MSN5YDR335W YKL065W-AQ2V2P2 73 aa0.72□□□□□ -2.29
MSN5YDR335W MHF1Q3E835 90 aa0.72□□□□□ -2.29
MSN5YDR335W YSF3P0C074 85 aaPredicted RBP0.72□□□□□ -2.29
MSN5YDR335W GCV3P39726 170 aaPredicted RBP0.72□□□□□ -2.29
MSN5YDR335W CCW12Q12127 133 aa0.71□□□□□ -2.3
MSN5YDR335W YDR246W-AQ3E763 66 aa0.71□□□□□ -2.3
MSN5YDR335W YFR010W-AP0C5N0 62 aa0.71□□□□□ -2.3
MSN5YDR335W YHR212W-AP0CX91 67 aa0.71□□□□□ -2.3
MSN5YDR335W ATG8P38182 117 aaRIP-Chip data0.71□□□□□ -2.3not detected
MSN5YDR335W AIM4P38305 123 aaPredicted RBP0.71□□□□□ -2.3
MSN5YDR335W SPI1P40092 148 aa0.71□□□□□ -2.3
MSN5YDR335W YAR064WP39563 99 aa0.71□□□□□ -2.3
MSN5YDR335W CWP2P43497 92 aa0.71□□□□□ -2.3
MSN5YDR335W PAU5P43575 122 aa0.71□□□□□ -2.3
MSN5YDR335W LCL2Q08045 131 aa0.71□□□□□ -2.3
MSN5YDR335W YOR072WQ08486 104 aa0.71□□□□□ -2.3
MSN5YDR335W YGR035W-AQ45U48 73 aa0.71□□□□□ -2.3
MSN5YDR335W YER188C-AP0C0V2 99 aa0.7□□□□□ -2.3
MSN5YDR335W YFL041W-AQ3E817 63 aa0.7□□□□□ -2.3
MSN5YDR335W HPA2Q06592 156 aa0.7□□□□□ -2.3
MSN5YDR335W AIM19P40502 157 aa0.7□□□□□ -2.3
MSN5YDR335W PAU23Q07987 124 aa0.7□□□□□ -2.3
MSN5YDR335W PAU17Q12370 124 aa0.7□□□□□ -2.3
MSN5YDR335W YLR255CO13574 117 aa0.69□□□□□ -2.3
MSN5YDR335W PAI3P01094 68 aa0.69□□□□□ -2.3
MSN5YDR335W LSM6Q06406 86 aaKnown RBP0.69□□□□□ -2.3
MSN5YDR335W YDL012CQ12489 107 aa0.69□□□□□ -2.3
MSN5YDR335W YCR095W-AQ3E787 52 aa0.69□□□□□ -2.3
MSN5YDR335W COA3Q3E7B2 85 aa0.69□□□□□ -2.3
MSN5YDR335W YDR524C-BQ3E6R4 66 aa0.69□□□□□ -2.3
MSN5YDR335W YGL041C-BQ3E750 60 aa0.69□□□□□ -2.3
MSN5YDR335W YGR240C-AQ3E786 66 aa0.69□□□□□ -2.3
MSN5YDR335W YBR292CP38357 123 aa0.68□□□□□ -2.3
MSN5YDR335W YLR285C-AQ3E771 56 aa0.68□□□□□ -2.3
MSN5YDR335W YPR117WQ06116 2489 aa0.68□□□□□ -2.3
MSN5YDR335W BSC4P53841 131 aa0.67□□□□□ -2.3
MSN5YDR335W MGR2Q02889 113 aa0.67□□□□□ -2.3
MSN5YDR335W RPS22AP0C0W1 130 aaKnown RBP0.67□□□□□ -2.3
MSN5YDR335W YNL198CP40166 100 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms