RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeast

Gene RCR1, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR1	YBR005W	GTT1	P40582	234 aa		5.01	□□□□□ -1.61
RCR1	YBR005W	EDC2	P40023	145 aa	Predicted RBP	5	□□□□□ -1.61
RCR1	YBR005W	YML108W	Q03759	105 aa		5	□□□□□ -1.61
RCR1	YBR005W	KSH1	Q8TGJ3	72 aa		5	□□□□□ -1.61
RCR1	YBR005W	SPG1	P50088	95 aa		4.99	□□□□□ -1.61
RCR1	YBR005W	YLR112W	Q12130	139 aa		4.99	□□□□□ -1.61
RCR1	YBR005W	ATP16	Q12165	160 aa		4.99	□□□□□ -1.61
RCR1	YBR005W	MRPL33	P20084	86 aa		4.98	□□□□□ -1.61
RCR1	YBR005W	YML079W	Q03629	201 aa		4.98	□□□□□ -1.61
RCR1	YBR005W	YMR103C	Q04436	120 aa		4.97	□□□□□ -1.61
RCR1	YBR005W	RPL18A	P0CX49	186 aa	Known RBP	4.96	□□□□□ -1.62
RCR1	YBR005W	RPL18B	P0CX50	186 aa	Known RBP	4.96	□□□□□ -1.62
RCR1	YBR005W	SCM4	P32564	187 aa		4.96	□□□□□ -1.62
RCR1	YBR005W	IGD1	P43598	195 aa		4.96	□□□□□ -1.62
RCR1	YBR005W	AIM11	P87275	137 aa		4.96	□□□□□ -1.62
RCR1	YBR005W	CYT2	Q00873	224 aa		4.96	□□□□□ -1.62
RCR1	YBR005W	YKL023C-A	Q2V2P3	75 aa		4.96	□□□□□ -1.62
RCR1	YBR005W	YGR121W-A	Q3E816	71 aa		4.96	□□□□□ -1.62
RCR1	YBR005W	RPL29	P05747	59 aa	Predicted RBP	4.95	□□□□□ -1.62
RCR1	YBR005W	YJR085C	P47131	105 aa	Known RBP	4.95	□□□□□ -1.62
RCR1	YBR005W	MRPL24	P36525	258 aa	Predicted RBP	4.94	□□□□□ -1.62
RCR1	YBR005W	POP3	P53833	195 aa	Predicted RBP	4.94	□□□□□ -1.62
RCR1	YBR005W	RPL26A	P05743	127 aa	Known RBP	4.93	□□□□□ -1.62
RCR1	YBR005W	GSP2	P32836	220 aa	Known RBP	4.93	□□□□□ -1.62
RCR1	YBR005W	RPL26B	P53221	127 aa	Known RBP	4.93	□□□□□ -1.62
RCR1	YBR005W	DDR2	P89113	61 aa		4.93	□□□□□ -1.62
RCR1	YBR005W	YNL190W	P53872	204 aa		4.92	□□□□□ -1.62
RCR1	YBR005W	ARL3	Q02804	198 aa		4.92	□□□□□ -1.62
RCR1	YBR005W	YLL006W-A	Q3E814	58 aa		4.92	□□□□□ -1.62
RCR1	YBR005W	SPT4	P32914	102 aa	Predicted RBP	4.9	□□□□□ -1.63
RCR1	YBR005W	YPL261C	Q08976	102 aa		4.9	□□□□□ -1.63
RCR1	YBR005W	YPL257W	Q08974	193 aa		4.89	□□□□□ -1.63
RCR1	YBR005W	YNL042W-B	Q3E7Z2	85 aa		4.88	□□□□□ -1.63
RCR1	YBR005W	FYV4	P38783	130 aa	Predicted RBP	4.87	□□□□□ -1.63
RCR1	YBR005W	YER134C	P40081	178 aa		4.87	□□□□□ -1.63
RCR1	YBR005W	UBC11	P52492	156 aa		4.87	□□□□□ -1.63
RCR1	YBR005W	HPA2	Q06592	156 aa		4.87	□□□□□ -1.63
RCR1	YBR005W	YLR050C	Q12155	161 aa	Known RBP	4.87	□□□□□ -1.63
RCR1	YBR005W	YKR041W	P36134	250 aa		4.86	□□□□□ -1.63
RCR1	YBR005W	YOR020W-A	Q3E824	90 aa		4.86	□□□□□ -1.63
RCR1	YBR005W	KRE1	P17260	313 aa		4.85	□□□□□ -1.63
RCR1	YBR005W	COX10	P21592	462 aa		4.85	□□□□□ -1.63
RCR1	YBR005W	YNL162W-A	Q3E7A8	72 aa		4.85	□□□□□ -1.63
RCR1	YBR005W	ATP5	P09457	212 aa		4.84	□□□□□ -1.63
RCR1	YBR005W	SSS1	P35179	80 aa		4.84	□□□□□ -1.63
RCR1	YBR005W	RPL28	P02406	149 aa	Known RBP	4.83	□□□□□ -1.64
RCR1	YBR005W	CUE4	Q04201	117 aa	Predicted RBP	4.83	□□□□□ -1.64
RCR1	YBR005W	PAU17	Q12370	124 aa		4.83	□□□□□ -1.64
RCR1	YBR005W	MRPL11	P36521	249 aa	Predicted RBP	4.82	□□□□□ -1.64
RCR1	YBR005W	SEN15	Q04675	128 aa		4.82	□□□□□ -1.64
RCR1	YBR005W	SCS22	Q6Q595	175 aa		4.82	□□□□□ -1.64
RCR1	YBR005W	YHL018W	P38744	120 aa	Predicted RBP	4.81	□□□□□ -1.64
RCR1	YBR005W	MRPS12	P53732	153 aa		4.81	□□□□□ -1.64
RCR1	YBR005W	CNL1	Q06333	122 aa		4.81	□□□□□ -1.64
RCR1	YBR005W	YAL063C-A	Q3E791	96 aa		4.81	□□□□□ -1.64
RCR1	YBR005W	IGO2	Q9P305	131 aa		4.81	□□□□□ -1.64
RCR1	YBR005W	YLR236C	A0A023PZG4	107 aa		4.79	□□□□□ -1.64
RCR1	YBR005W	UGX2	P32772	223 aa		4.79	□□□□□ -1.64
RCR1	YBR005W	DUT1	P33317	147 aa		4.79	□□□□□ -1.64
RCR1	YBR005W	YJL127C-B	Q3E828	52 aa		4.79	□□□□□ -1.64
RCR1	YBR005W	YIL134C-A	Q45U18	67 aa		4.79	□□□□□ -1.64
RCR1	YBR005W	YDL022C-A	P0C5L6	82 aa		4.78	□□□□□ -1.64
RCR1	YBR005W	YKL044W	P36092	106 aa		4.78	□□□□□ -1.64
RCR1	YBR005W	ICY1	Q04329	127 aa		4.78	□□□□□ -1.64
RCR1	YBR005W	YBR230W-A	Q3E762	66 aa		4.78	□□□□□ -1.64
RCR1	YBR005W	FYV5	P25585	152 aa		4.77	□□□□□ -1.65
RCR1	YBR005W	BSC4	P53841	131 aa		4.77	□□□□□ -1.65
RCR1	YBR005W	HOT13	P36078	116 aa		4.75	□□□□□ -1.65
RCR1	YBR005W	YPL073C	P40323	161 aa		4.75	□□□□□ -1.65
RCR1	YBR005W	YIA6	P40556	373 aa		4.75	□□□□□ -1.65
RCR1	YBR005W	RGM1	Q00453	211 aa		4.75	□□□□□ -1.65
RCR1	YBR005W	IRC21	Q04772	201 aa		4.75	□□□□□ -1.65
RCR1	YBR005W	COA6	Q3E846	104 aa		4.75	□□□□□ -1.65
RCR1	YBR005W	YCR007C	P25354	239 aa		4.74	□□□□□ -1.65
RCR1	YBR005W	YEL067C	P39978	195 aa		4.74	□□□□□ -1.65
RCR1	YBR005W	YOR072W	Q08486	104 aa		4.73	□□□□□ -1.65
RCR1	YBR005W	SFT1	P43682	97 aa		4.72	□□□□□ -1.65
RCR1	YBR005W	YHR007C-A	Q07074	71 aa		4.72	□□□□□ -1.65
RCR1	YBR005W	YHL005C	P38752	130 aa		4.71	□□□□□ -1.66
RCR1	YBR005W	SEC11	P15367	167 aa		4.7	□□□□□ -1.66
RCR1	YBR005W	COX7	P10174	60 aa		4.69	□□□□□ -1.66
RCR1	YBR005W	MRPL44	P19956	98 aa		4.69	□□□□□ -1.66
RCR1	YBR005W	YBR027C	P38220	110 aa		4.69	□□□□□ -1.66
RCR1	YBR005W	BET1	P22804	142 aa		4.68	□□□□□ -1.66
RCR1	YBR005W	RPL37B	P51402	88 aa	Known RBP	4.68	□□□□□ -1.66
RCR1	YBR005W	YGL230C	P53074	147 aa		4.68	□□□□□ -1.66
RCR1	YBR005W	PAU23	Q07987	124 aa		4.68	□□□□□ -1.66
RCR1	YBR005W	YHR139C-A	O13536	103 aa		4.67	□□□□□ -1.66
RCR1	YBR005W	RPL36B	O14455	100 aa	Known RBP	4.67	□□□□□ -1.66
RCR1	YBR005W	YHR130C	P38834	111 aa		4.67	□□□□□ -1.66
RCR1	YBR005W	MSL1	P40567	111 aa	Predicted RBP	4.67	□□□□□ -1.66
RCR1	YBR005W	CGR1	P53188	120 aa		4.67	□□□□□ -1.66
RCR1	YBR005W	YNR077C	P53758	84 aa		4.67	□□□□□ -1.66
RCR1	YBR005W	FUN14	P18411	198 aa		4.66	□□□□□ -1.66
RCR1	YBR005W	YNL122C	P53921	115 aa	Predicted RBP	4.65	□□□□□ -1.67
RCR1	YBR005W	YDL157C	Q12082	118 aa		4.65	□□□□□ -1.67
RCR1	YBR005W	MID2	P36027	376 aa		4.64	□□□□□ -1.67
RCR1	YBR005W	NAT5	Q08689	176 aa		4.64	□□□□□ -1.67
RCR1	YBR005W	OST2	P46964	130 aa		4.63	□□□□□ -1.67
RCR1	YBR005W	FYV7	Q12247	151 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms