RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 MCOLN2Q8IZK6 566 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 KREMEN2Q8NCW0 462 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 C1orf131Q8NDD1 294 aaKnown RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 CMASQ8NFW8 434 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 VN1R2Q8NFZ6 395 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 MCRS1Q96EZ8 462 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 LRCH3Q96II8 777 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 PGLYRP2Q96PD5 576 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 LRRC3Q9BY71 257 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 NSUN3Q9H649 340 aaKnown RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 AVENQ9NQS1 362 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 ABI2Q9NYB9 513 aaPredicted RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.62□□□□□ -0.87
SCARB2-225ENST00000640900 HESX1Q9UBX0 185 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 YIPF1Q9Y548 306 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 INSL5Q9Y5Q6 135 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 MTCH2Q9Y6C9 303 aa9.62□□□□□ -0.87
SCARB2-225ENST00000640900 ANKRD62A6NC57 917 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 RCCD1A6NED2 376 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 BTNL10A8MVZ5 291 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 PAPSS1O43252 624 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 AKR1B10O60218 316 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ZMYND10O75800 440 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ERBB2P04626 1255 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 CYP1A2P05177 515 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 HNRNPA1P09651 372 aaKnown RBP eCLIP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ZDHHC11BP0C7U3 371 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 KLRC2P26717 231 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 SSTR3P32745 418 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 CYLC1P35663 651 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ACADSBP45954 432 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 GPR15P49685 360 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 EPHA5P54756 1037 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ARPP19P56211 112 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 MAP3K7CLP57077 242 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 RPL10AP62906 217 aaKnown RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ZNF268Q14587 947 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 HABP4Q5JVS0 413 aaKnown RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 PPP1R15BQ5SWA1 713 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 SNX30Q5VWJ9 437 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 PLEKHA7Q6IQ23 1121 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 CCDC149Q6ZUS6 474 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 TOGARAM2Q6ZUX3 1019 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 XYLT1Q86Y38 959 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ZDHHC17Q8IUH5 632 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ZNF276Q8N554 614 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 EFHBQ8N7U6 833 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 MICAL1Q8TDZ2 1067 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 CPA5Q8WXQ8 436 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 TRMT2BQ96GJ1 504 aaKnown RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 PPP1R13BQ96KQ4 1090 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ZNF830Q96NB3 372 aaPredicted RBP9.61□□□□□ -0.87
SCARB2-225ENST00000640900 MED10Q9BTT4 135 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 PRDM12Q9H4Q4 367 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 TLE6Q9H808 572 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 SPTLC3Q9NUV7 552 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 TJP2Q9UDY2 1190 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 SLC27A5Q9Y2P5 690 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 ASB3Q9Y575 518 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 CEP83Q9Y592 693 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 HCFC2Q9Y5Z7 792 aa9.61□□□□□ -0.87
SCARB2-225ENST00000640900 SPTBN5Q9NRC6 3674 aaKnown RBP9.6□□□□□ -0.87
SCARB2-225ENST00000640900 XIRP2A4UGR9 3374 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 PRUNE2Q8WUY3 3088 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 E5RJQ4 531 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 PER2O15055 1255 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 SOAT2O75908 522 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 MTA2O94776 668 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 FBXO21O94952 628 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 GLP2RO95838 553 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 TMEM253P0C7T8 217 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 MYBL1P10243 752 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 EPCAMP16422 314 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 GRIK1P39086 918 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 NSFP46459 744 aaKnown RBP9.6□□□□□ -0.87
SCARB2-225ENST00000640900 SLC5A3P53794 718 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 GALCP54803 685 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 HADHBP55084 474 aaKnown RBP9.6□□□□□ -0.87
SCARB2-225ENST00000640900 SLC8A3P57103 927 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 USP46P62068 366 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 ADAM15Q13444 863 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 DDR2Q16832 855 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 TCEAL5Q5H9L2 206 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 CCDC122Q5T0U0 273 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 OLFML1Q6UWY5 402 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 MMS22LQ6ZRQ5 1243 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 SLC26A9Q7LBE3 791 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 ERICH1Q86X53 443 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 NUP93Q8N1F7 819 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 C3orf20Q8ND61 904 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 SCAMP5Q8TAC9 235 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 IRGQQ8WZA9 623 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 PSMG2Q969U7 264 aa9.6□□□□□ -0.87
SCARB2-225ENST00000640900 ZNF707Q96C28 371 aaPredicted RBP9.6□□□□□ -0.87
SCARB2-225ENST00000640900 C18orf8Q96DM3 657 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms