RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 INHBAP08476 426 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 IL1R2P27930 398 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 PDCD2Q16342 344 aaPredicted RBP14.29□□□□□ -0.12
PAX6-280ENST00000640872 SMTNL2Q2TAL5 461 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 ZBTB41Q5SVQ8 909 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 CES4AQ5XG92 561 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 ARFGAP1Q8N6T3 406 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 SMC1BQ8NDV3 1235 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 OR5B17Q8NGF7 314 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 NCSTNQ92542 709 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 TUBGCP5Q96RT8 1024 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 POLR3FQ9H1D9 316 aaPredicted RBP14.29□□□□□ -0.12
PAX6-280ENST00000640872 SLC7A8Q9UHI5 535 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 TAGLN3Q9UI15 199 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 TEX264Q9Y6I9 313 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 IKBKGQ9Y6K9 419 aa14.29□□□□□ -0.12
PAX6-280ENST00000640872 H0YCG3 227 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 CIB2O75838 187 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 CDC16Q13042 620 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 CUL3Q13618 768 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 DNAL1Q4LDG9 190 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 ARHGAP18Q8N392 663 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 WDTC1Q8N5D0 677 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 TMEM35BQ8NCS4 154 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 CLPTM1LQ96KA5 538 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 PDCD2LQ9BRP1 358 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 ZWILCHQ9H900 591 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 GPAMQ9HCL2 828 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 NDE1Q9NXR1 346 aa14.28□□□□□ -0.12
PAX6-280ENST00000640872 PPARGC1AQ9UBK2 798 aaKnown RBP14.28□□□□□ -0.12
PAX6-280ENST00000640872 SPECC1L-ADORA2AF8WAN1 911 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 I3L4J1 428 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 COPEO14579 308 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 BUD23O43709 281 aaKnown RBP14.27□□□□□ -0.12
PAX6-280ENST00000640872 ZCCHC18P0CG32 403 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 KDELR1P24390 212 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 BRD2P25440 801 aaKnown RBP14.27□□□□□ -0.12
PAX6-280ENST00000640872 GSTT1P30711 240 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 RPS6P62753 249 aaKnown RBP14.27□□□□□ -0.12
PAX6-280ENST00000640872 AP2B1P63010 937 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 BASP1P80723 227 aaKnown RBP14.27□□□□□ -0.12
PAX6-280ENST00000640872 CDK18Q07002 472 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 BST1Q10588 318 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 DYNC1I2Q13409 638 aaKnown RBP14.27□□□□□ -0.12
PAX6-280ENST00000640872 DPYSL3Q14195 570 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 CYP4A22Q5TCH4 519 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 FAM71DQ8N9W8 422 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 MECRQ9BV79 373 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 DMAP1Q9NPF5 467 aaPredicted RBP14.27□□□□□ -0.12
PAX6-280ENST00000640872 TBC1D30Q9Y2I9 924 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 CNTNAP2Q9UHC6 1331 aa14.27□□□□□ -0.12
PAX6-280ENST00000640872 LRCH4O75427 683 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 SPAG6O75602 509 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 STIP1P31948 543 aaKnown RBP14.27□□□□□ -0.13
PAX6-280ENST00000640872 CDH5P33151 784 aaPredicted RBP14.27□□□□□ -0.13
PAX6-280ENST00000640872 ABCD1P33897 745 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 NCOA4Q13772 614 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 CNPY1Q3B7I2 92 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 TEX44Q53QW1 395 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 MDH1BQ5I0G3 518 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 KCNT1Q5JUK3 1230 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 C6orf163Q5TEZ5 329 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 ARID3BQ8IVW6 561 aaPredicted RBP14.27□□□□□ -0.13
PAX6-280ENST00000640872 TRIM42Q8IWZ5 723 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 THNSL1Q8IYQ7 743 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 CPXCR1Q8N123 301 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 ZBTB45Q96K62 511 aaPredicted RBP14.27□□□□□ -0.13
PAX6-280ENST00000640872 ZNF518BQ9C0D4 1074 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 WWP1Q9H0M0 922 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 PNPLA8Q9NP80 782 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 HOMER2Q9NSB8 354 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
PAX6-280ENST00000640872 PPM1HQ9ULR3 514 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 PLLPQ9Y342 182 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 SIP14410 1827 aa14.27□□□□□ -0.13
PAX6-280ENST00000640872 A0A1B0GVG6 124 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
PAX6-280ENST00000640872 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 TRIM49D1C9J1S8 452 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 KRT7P08729 469 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 CD48P09326 243 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 PSMA2P25787 234 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 CDK7P50613 346 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 NRLP54845 237 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
PAX6-280ENST00000640872 TTC39BQ5VTQ0 682 aaPredicted RBP14.26□□□□□ -0.13
PAX6-280ENST00000640872 GPAT2Q6NUI2 795 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 KYAT3Q6YP21 454 aaKnown RBP14.26□□□□□ -0.13
PAX6-280ENST00000640872 PRPF39Q86UA1 669 aaKnown RBP14.26□□□□□ -0.13
PAX6-280ENST00000640872 SLC26A11Q86WA9 606 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 FAM151AQ8WW52 585 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 ATP6V0A1Q93050 837 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 THTPAQ9BU02 230 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 SPATA16Q9BXB7 569 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 IQCGQ9H095 443 aaKnown RBP14.26□□□□□ -0.13
PAX6-280ENST00000640872 PXMP2Q9NR77 195 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 SIRPGQ9P1W8 387 aa14.26□□□□□ -0.13
PAX6-280ENST00000640872 TTLL3Q9Y4R7 772 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms