RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 EFTUD2Q15029 972 aaKnown RBP eCLIP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 NAB2Q15742 525 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 PALB2Q86YC2 1186 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 SLC13A1Q9BZW2 595 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 DDX47Q9H0S4 455 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 DMAP1Q9NPF5 467 aaPredicted RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 RRN3Q9NYV6 651 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 ZNF536O15090 1300 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 ATRNO75882 1429 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 CBX4O00257 560 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 PYGBP11216 843 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 FDPSP14324 419 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 MZF1P28698 734 aaPredicted RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 PTGER2P43116 358 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 ACAD10Q6JQN1 1059 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 NUDCD3Q8IVD9 361 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 PGLYRP2Q96PD5 576 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 ASAH2Q9NR71 780 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 SPG21Q9NZD8 308 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 ZC3H7BQ9UGR2 993 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 AAR2Q9Y312 384 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 TOPAZ1Q8N9V7 1692 aa9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 SETD1AO15047 1707 aaKnown RBP9.7□□□□□ -0.86
CACNA1D-230ENST00000640483 TRAV19A0A0A6YYK7 116 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CCDC78A2IDD5 438 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 E2F6O75461 281 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 FDFT1P37268 417 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SERPINB9P50453 376 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 MDM2Q00987 491 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SMTNL2Q2TAL5 461 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SPRYD7Q5W111 196 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 FAM47EQ6ZV65 393 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ADGRE3Q9BY15 652 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 IL17RBQ9NRM6 502 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PSD3Q9NYI0 1048 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 TPX2Q9ULW0 747 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PIK3C2AO00443 1686 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PARNO95453 639 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 TMEM253P0C7T8 217 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CCR1P32246 355 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PDK2Q15119 407 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 NOMO2Q5JPE7 1267 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ZPBP2Q6X784 338 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SYTL1Q8IYJ3 562 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CAMKK1Q8N5S9 505 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CYTH2Q99418 400 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CNPPD1Q9BV87 410 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CELF4Q9BZC1 486 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 FANCEQ9HB96 536 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 STX18Q9P2W9 335 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 BARX2Q9UMQ3 279 aaPredicted RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ELNP15502 786 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ITGALP20701 1170 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PKN2Q16513 984 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 EPC2Q52LR7 807 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ZNF720Q7Z2F6 126 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 BLOC1S5Q8TDH9 187 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 MKL1Q969V6 931 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SLC4A9Q96Q91 983 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CBWD1Q9BRT8 395 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PKD2L2Q9NZM6 624 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 MRPS23Q9Y3D9 190 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 STRCQ7RTU9 1775 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 A0A0G2JND7 137 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 OPHN1O60890 802 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PHF2O75151 1096 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ATP5BP06576 529 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 RAP1GDS1P52306 607 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 MYL6P60660 151 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 MAPRE2Q15555 327 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 MCOLN3Q8TDD5 553 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 LRRC46Q96FV0 321 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SERPINB11Q96P15 392 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PPARGC1AQ9UBK2 798 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 A0A1W2PQJ5 194 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 POLR2EP19388 210 aaKnown RBP9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SOX10P56693 466 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 USP41Q3LFD5 358 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ATAT1Q5SQI0 421 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 SYCP2LQ5T4T6 812 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PTF1AQ7RTS3 328 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 CCDC138Q96M89 665 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 TLE6Q9H808 572 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 PDGFCQ9NRA1 345 aa9.69□□□□□ -0.86
CACNA1D-230ENST00000640483 BTBD19C9JJ37 291 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CST8O60676 142 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 DCTN3O75935 186 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 KITP10721 976 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 NR1D1P20393 614 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 PTPN11Q06124 597 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 NCAPHQ15003 741 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 TBC1D25Q3MII6 688 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 COBLL1Q53SF7 1204 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 HLA-DQA1Q5Y7H0 255 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms