RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 TNIP3Q96KP6 325 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 LINC00597Q9H2U6 94 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 FBRSL1Q9HCM7 1045 aaKnown RBP18.82■□□□□ 0.6
PNKP-230ENST00000638016 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 FBXO4Q9UKT5 387 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 MYOFQ9NZM1 2061 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 SOBPA7XYQ1 873 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 TNFRSF10BO14763 440 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 CETN3O15182 167 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 TDGF1P13385 188 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 P4HA1P13674 534 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 BMP6P22004 513 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 MLLT6P55198 1093 aaPredicted RBP18.81■□□□□ 0.6
PNKP-230ENST00000638016 DMWDQ09019 674 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 CCINQ13939 588 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 CBWD6Q4V339 395 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 DCAF17Q5H9S7 520 aaPredicted RBP18.81■□□□□ 0.6
PNKP-230ENST00000638016 CBWD3Q5JTY5 395 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 CBWD5Q5RIA9 395 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 FSTL4Q6MZW2 842 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 CC2D1AQ6P1N0 951 aaPredicted RBP18.81■□□□□ 0.6
PNKP-230ENST00000638016 GPRIN1Q7Z2K8 1008 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 NUP93Q8N1F7 819 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 JAKMIP2Q96AA8 810 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 SMARCD1Q96GM5 515 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 MSANTD3Q96H12 275 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 TIGD1Q96MW7 591 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 ARID3AQ99856 593 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 NIF3L1Q9GZT8 377 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 DMAP1Q9NPF5 467 aaPredicted RBP18.81■□□□□ 0.6
PNKP-230ENST00000638016 POLR3BQ9NW08 1133 aaPredicted RBP18.81■□□□□ 0.6
PNKP-230ENST00000638016 DUS2Q9NX74 493 aaKnown RBP18.81■□□□□ 0.6
PNKP-230ENST00000638016 ARHGAP26Q9UNA1 814 aa18.81■□□□□ 0.6
PNKP-230ENST00000638016 LEFTY2O00292 366 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 SMC2O95347 1197 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 OAS1P00973 400 aaKnown RBP18.8■□□□□ 0.6
PNKP-230ENST00000638016 EPB41P11171 864 aaKnown RBP18.8■□□□□ 0.6
PNKP-230ENST00000638016 YWHAQP27348 245 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 MXI1P50539 228 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 INCA1Q0VD86 236 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 EML3Q32P44 896 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 ZNF394Q53GI3 561 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 COBLL1Q53SF7 1204 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 KRT39Q6A163 491 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 ZC3H3Q8IXZ2 948 aaKnown RBP18.8■□□□□ 0.6
PNKP-230ENST00000638016 CRYBG2Q8N1P7 616 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 OSCP1Q8WVF1 389 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 FBXO32Q969P5 355 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 CEP295NLQ96MC4 621 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 IMPG2Q9BZV3 1241 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 GMIPQ9P107 970 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 CHORDC1Q9UHD1 332 aaPredicted RBP18.8■□□□□ 0.6
PNKP-230ENST00000638016 CPQQ9Y646 472 aa18.8■□□□□ 0.6
PNKP-230ENST00000638016 ATP8B3O60423 1300 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 BIN1O00499 593 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 CILPO75339 1184 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 OLFM2O95897 454 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 GJA4P35212 333 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 IFNAR2P48551 515 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 MCCD1P59942 119 aaPredicted RBP18.79■□□□□ 0.6
PNKP-230ENST00000638016 ZNF528Q3MIS6 628 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 TCERG1LQ5VWI1 586 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 UNC93AQ86WB7 457 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 EZH1Q92800 747 aaPredicted RBP18.79■□□□□ 0.6
PNKP-230ENST00000638016 NELL1Q92832 810 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 TATDN2Q93075 761 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 SLITRK1Q96PX8 696 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 TSG101Q99816 390 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 ECT2Q9H8V3 914 aa18.79■□□□□ 0.6
PNKP-230ENST00000638016 ANTXRLA6NF34 631 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 EGFP01133 1207 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 LMNAP02545 664 aaKnown RBP18.78■□□□□ 0.6
PNKP-230ENST00000638016 ENPEPQ07075 957 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 LRRC32Q14392 662 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 PDGFRLQ15198 375 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 KLHL10Q6JEL2 608 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 ZC3H14Q6PJT7 736 aaKnown RBP18.78■□□□□ 0.6
PNKP-230ENST00000638016 DCLK2Q8N568 766 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 SUMF1Q8NBK3 374 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 ZBTB44Q8NCP5 570 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 WBP2Q969T9 261 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 CCSER2Q9H7U1 834 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 RAB20Q9NX57 234 aa18.78■□□□□ 0.6
PNKP-230ENST00000638016 HHLA1C9JL84 531 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 COCHO43405 550 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 KINO60870 393 aaKnown RBP18.77■□□□□ 0.6
PNKP-230ENST00000638016 MBL2P11226 248 aaPredicted RBP18.77■□□□□ 0.6
PNKP-230ENST00000638016 GTF2H1P32780 548 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CXCL12P48061 93 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 GALK1P51570 392 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 SLC7A9P82251 487 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 TMEM196Q5HYL7 178 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 C1orf228Q6PIY5 440 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CLEC20AQ6ZU45 233 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CPA6Q8N4T0 437 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 FBXL13Q8NEE6 735 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CYFIP2Q96F07 1278 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 ZFRQ96KR1 1074 aaKnown RBP18.77■□□□□ 0.6
PNKP-230ENST00000638016 DUSP9Q99956 384 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms