RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 PTPN1P18031 435 aaKnown RBP19.03■□□□□ 0.64
CIITA-215ENST00000637439 NASPP49321 788 aaPredicted RBP19.03■□□□□ 0.64
CIITA-215ENST00000637439 TAF10Q12962 218 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 PSMD6Q15008 389 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 STK38Q15208 465 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 DHCR24Q15392 516 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 GAB4Q2WGN9 574 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 WDR72Q3MJ13 1102 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 CYP2U1Q7Z449 544 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 GLIS3Q8NEA6 775 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 PDZD8Q8NEN9 1154 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
CIITA-215ENST00000637439 CGRRF1Q99675 332 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 MRPL45Q9BRJ2 306 aaKnown RBP19.03■□□□□ 0.64
CIITA-215ENST00000637439 TBC1D14Q9P2M4 693 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 INVSQ9Y283 1065 aa19.03■□□□□ 0.64
CIITA-215ENST00000637439 UBE4BO95155 1302 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.02■□□□□ 0.64
CIITA-215ENST00000637439 STAU1O95793 577 aaKnown RBP19.02■□□□□ 0.64
CIITA-215ENST00000637439 CST3P01034 146 aaPredicted RBP19.02■□□□□ 0.64
CIITA-215ENST00000637439 APODP05090 189 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 HOXD13P35453 343 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 NOVA1P51513 510 aaKnown RBP19.02■□□□□ 0.64
CIITA-215ENST00000637439 ASIC1P78348 528 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 FAM26FQ5R3K3 315 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 CNNM4Q6P4Q7 775 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 EPM2AIP1Q7L775 607 aaPredicted RBP19.02■□□□□ 0.64
CIITA-215ENST00000637439 CCDC33Q8N5R6 958 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 RDH13Q8NBN7 331 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 OVCA2Q8WZ82 227 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 HPS3Q969F9 1004 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 POLMQ9NP87 494 aaPredicted RBP19.02■□□□□ 0.64
CIITA-215ENST00000637439 TMEM9BQ9NQ34 198 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 AGPAT3Q9NRZ7 376 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 SMPD4Q9NXE4 827 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 CFAP97Q9P2B7 532 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 MTMR6Q9Y217 621 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 THADAQ6YHU6 1953 aa19.02■□□□□ 0.64
CIITA-215ENST00000637439 ATP8B3O60423 1300 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 A0A0A0MRY4 1105 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 A8MXQ7 604 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 PPP6R2O75170 966 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 RTN3O95197 1032 aaPredicted RBP19.01■□□□□ 0.63
CIITA-215ENST00000637439 KAT7O95251 611 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 MBL2P11226 248 aaPredicted RBP19.01■□□□□ 0.63
CIITA-215ENST00000637439 ATICP31939 592 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 CYP24A1Q07973 514 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 TRPC3Q13507 836 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 E2F4Q16254 413 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 EOGTQ5NDL2 527 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 TTC30AQ86WT1 665 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 NUP93Q8N1F7 819 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 IQUBQ8NA54 791 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 XXYLT1Q8NBI6 393 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 LINC00301Q8NCQ3 95 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 B3GALNT2Q8NCR0 500 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 MDGA1Q8NFP4 955 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 OLIG1Q8TAK6 271 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 WHAMMQ8TF30 809 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 CCDC127Q96BQ5 260 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 OTUB2Q96DC9 234 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 SPACA7Q96KW9 195 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 CGNQ9P2M7 1197 aaKnown RBP19.01■□□□□ 0.63
CIITA-215ENST00000637439 CEP295Q9C0D2 2601 aa19.01■□□□□ 0.63
CIITA-215ENST00000637439 ABCA7Q8IZY2 2146 aa19■□□□□ 0.63
CIITA-215ENST00000637439 E2F8A0AVK6 867 aa19■□□□□ 0.63
CIITA-215ENST00000637439 SPTLC2O15270 562 aa19■□□□□ 0.63
CIITA-215ENST00000637439 TGFB1I1O43294 461 aa19■□□□□ 0.63
CIITA-215ENST00000637439 ADH5P11766 374 aa19■□□□□ 0.63
CIITA-215ENST00000637439 YWHAQP27348 245 aa19■□□□□ 0.63
CIITA-215ENST00000637439 GRIA2P42262 883 aa19■□□□□ 0.63
CIITA-215ENST00000637439 TNFRSF4P43489 277 aa19■□□□□ 0.63
CIITA-215ENST00000637439 DHPSP49366 369 aaPredicted RBP19■□□□□ 0.63
CIITA-215ENST00000637439 CYP2J2P51589 502 aa19■□□□□ 0.63
CIITA-215ENST00000637439 BYSLQ13895 437 aaKnown RBP19■□□□□ 0.63
CIITA-215ENST00000637439 PREPLQ4J6C6 727 aaPredicted RBP19■□□□□ 0.63
CIITA-215ENST00000637439 RHBDF2Q6PJF5 856 aa19■□□□□ 0.63
CIITA-215ENST00000637439 TMEM92Q6UXU6 159 aa19■□□□□ 0.63
CIITA-215ENST00000637439 LPCAT2Q7L5N7 544 aa19■□□□□ 0.63
CIITA-215ENST00000637439 ALLCQ8N6M5 410 aa19■□□□□ 0.63
CIITA-215ENST00000637439 SYAP1Q96A49 352 aaPredicted RBP19■□□□□ 0.63
CIITA-215ENST00000637439 ZNF518BQ9C0D4 1074 aa19■□□□□ 0.63
CIITA-215ENST00000637439 MAGEF1Q9HAY2 307 aa19■□□□□ 0.63
CIITA-215ENST00000637439 ARHGEF4Q9NR80 690 aa19■□□□□ 0.63
CIITA-215ENST00000637439 NME7Q9Y5B8 376 aa19■□□□□ 0.63
CIITA-215ENST00000637439 ZFHX4Q86UP3 3567 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 MAP3K13O43283 966 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 STX6O43752 255 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 KLF8O95600 359 aaPredicted RBP18.99■□□□□ 0.63
CIITA-215ENST00000637439 CENPBP07199 599 aaPredicted RBP18.99■□□□□ 0.63
CIITA-215ENST00000637439 CSRP1P21291 193 aaKnown RBP18.99■□□□□ 0.63
CIITA-215ENST00000637439 BCKDHBP21953 392 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 TIE1P35590 1138 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 P2RY2P41231 377 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 DPP6P42658 865 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 SLC6A11P48066 632 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
CIITA-215ENST00000637439 SPDYCQ5MJ68 293 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 IL17RCQ8NAC3 791 aa18.99■□□□□ 0.63
CIITA-215ENST00000637439 TXNDC5Q8NBS9 432 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms