RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 BASP1P80723 227 aaKnown RBP16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 PRKG1Q13976 671 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 FAM102AQ5T9C2 384 aaPredicted RBP16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 CCDC62Q6P9F0 684 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 TTC39CQ8N584 583 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 TCP10LQ8TDR4 215 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 UTP4Q969X6 686 aaKnown RBP16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 FGD4Q96M96 766 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 FRMD8Q9BZ67 464 aaPredicted RBP16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 HMGXB4Q9UGU5 601 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 TEX264Q9Y6I9 313 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 ZSWIM8A7E2V4 1837 aa16.78■□□□□ 0.28
CHRNA7-221ENST00000636898 A8MUI8 341 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 IRF6O14896 467 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 HNRNPCL1O60812 293 aaKnown RBP16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 GJB1P08034 283 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 TROVE2P10155 538 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 GPD1P21695 349 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 PHKA2P46019 1235 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 INCA1Q0VD86 236 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 KCNJ11Q14654 390 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 TAF5Q15542 800 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 KYAT1Q16773 422 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 ACCSLQ4AC99 568 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 JADE1Q6IE81 842 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 CDR2LQ86X02 465 aaPredicted RBP16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 TRAPPC12Q8WVT3 735 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 N4BP2L2Q92802 583 aaPredicted RBP16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 RSRC1Q96IZ7 334 aaKnown RBP16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 SAR1AQ9NR31 198 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 KIAA1257Q9ULG3 409 aa16.77■□□□□ 0.28
CHRNA7-221ENST00000636898 C2CD4BA6NLJ0 364 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 IQCF3P0C7M6 154 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 TARSP26639 723 aaKnown RBP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 CLCN3P51790 818 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 ORC1Q13415 861 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 DARS2Q6PI48 645 aaKnown RBP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 CYP4V2Q6ZWL3 525 aaPredicted RBP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 NLRP9Q7RTR0 991 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 CHSY1Q86X52 802 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 CCDC125Q86Z20 511 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 SLC44A1Q8WWI5 657 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 THOC1Q96FV9 657 aaKnown RBP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 PEBP4Q96S96 227 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 ADAM33Q9BZ11 813 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 IFT122Q9HBG6 1241 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 BARX2Q9UMQ3 279 aaPredicted RBP16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 CSADQ9Y600 493 aa16.77■□□□□ 0.27
CHRNA7-221ENST00000636898 DNAJC25-GNG10A0A024R161 153 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 A0A0G2JLL6 359 aaPredicted RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 TCRBV9S1A1TA0A576 114 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 CNMDO75829 334 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 STAU1O95793 577 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 MT-ND3P03897 115 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 DHRS4L1P0CG22 281 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 T-ENOLP0DO92 83 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 ELK3P41970 407 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 CCNG1P51959 295 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 CDH6P55285 790 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 PRRT2Q7Z6L0 340 aaPredicted RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 MAP7D3Q8IWC1 876 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 GPATCH11Q8N954 259 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 NSMCE1Q8WV22 266 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 RTP4Q96DX8 246 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 HEXIM2Q96MH2 286 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 MANSC1Q9H8J5 431 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 PNPLA8Q9NP80 782 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 PAK5Q9P286 719 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 RPL26L1Q9UNX3 145 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 CHMP2BQ9UQN3 213 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 IKBKGQ9Y6K9 419 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 POLR2AP24928 1970 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 LOC102724159A0A0B4J2E5 919 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 FAM155BO75949 473 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 C22orf31O95567 290 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 ZNF200P98182 395 aaPredicted RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 SLC18A2Q05940 514 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 PDK2Q15119 407 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 PWP2Q15269 919 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 LCLAT1Q6UWP7 414 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 GADL1Q6ZQY3 521 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 USP6NLQ92738 828 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 SLC7A6OSQ96CW6 309 aaPredicted RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 LNPEPQ9UIQ6 1025 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 HAO1Q9UJM8 370 aa16.76■□□□□ 0.27
CHRNA7-221ENST00000636898 EVPLQ92817 2033 aa16.75■□□□□ 0.27
CHRNA7-221ENST00000636898 OTOFQ9HC10 1997 aa16.75■□□□□ 0.27
CHRNA7-221ENST00000636898 CFAP69A5D8W1 941 aa16.75■□□□□ 0.27
CHRNA7-221ENST00000636898 PRPSAP2O60256 369 aa16.75■□□□□ 0.27
CHRNA7-221ENST00000636898 IL1BP01584 269 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms