RNA–Protein interactions for RNA: ENST00000636507.1

CACNB4-227, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 4,688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-227ENST00000636507 CCDC160A6NGH7 325 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 AQP12BA6NM10 295 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TTLL13PA6NNM8 815 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TRIM38O00635 465 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 PFDN6O15212 129 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 GCNT3O95395 438 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 YBX3P16989 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 DDX5P17844 614 aaKnown RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 RFC1P35251 1148 aaPredicted RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 MAGEA6P43360 314 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TRIM71Q2Q1W2 868 aaKnown RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 C16orf87Q6PH81 154 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 VSTM1Q6UX27 236 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TRIM69Q86WT6 500 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 LACC1Q8IV20 430 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 NUDCD3Q8IVD9 361 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 MAPKAPK5Q8IW41 473 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 AQP12AQ8IXF9 295 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 SIX6OS1Q8N1H7 587 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 FBXW8Q8N3Y1 598 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 DDX54Q8TDD1 881 aaKnown RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 PTCD2Q8WV60 388 aaKnown RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 MAML1Q92585 1016 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 AKT1S1Q96B36 256 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TSPAN17Q96FV3 270 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 RBM17Q96I25 401 aaKnown RBP5.35□□□□□ -1.55
CACNB4-227ENST00000636507 EYA3Q99504 573 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TMEM120AQ9BXJ8 343 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 CPNE5Q9HCH3 593 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 DMAC2Q9NW81 257 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 CARD8Q9Y2G2 431 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 GRIP1Q9Y3R0 1128 aa5.35□□□□□ -1.55
CACNB4-227ENST00000636507 TMEM221A6NGB7 291 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 GSNP06396 782 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 DHRS4L1P0CG22 281 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 SERPINB6P35237 376 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 TXKP42681 527 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CCT8P50990 548 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 TXNL4AP83876 142 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 KRT76Q01546 638 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 OTUD4Q01804 1114 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 SUZ12Q15022 739 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CYTH1Q15438 398 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 QPCTQ16769 361 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 LRRC24Q50LG9 513 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 DCAF17Q5H9S7 520 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 SAMD4BQ5PRF9 694 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PPP1R15BQ5SWA1 713 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 LVRNQ6Q4G3 990 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 NCCRP1Q6ZVX7 275 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PGAM4Q8N0Y7 254 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 HELBQ8NG08 1087 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 FBXO25Q8TCJ0 367 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CALML6Q8TD86 181 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PARD3BQ8TEW8 1205 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CD101Q93033 1021 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 THAP11Q96EK4 314 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 MPP4Q96JB8 637 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 HOPXQ9BPY8 73 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 RMND5AQ9H871 391 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CNOT8Q9UFF9 292 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 MAD2L2Q9UI95 211 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 GIT1Q9Y2X7 761 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 GPC6Q9Y625 555 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 FAM172BPA6NC97 362 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 TRIM49BA6NDI0 452 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 B2RBV5 119 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 ZNF263O14978 683 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 NCAM2O15394 837 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 ZMYND10O75800 440 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 GPIP06744 558 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 SNHG28P0DPA3 235 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 M6PRP20645 277 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 SREBF1P36956 1147 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 RFC5P40937 340 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 TECP42680 631 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 GRSF1Q12849 480 aaKnown RBP eCLIP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PRKAA1Q13131 559 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CTTNQ14247 550 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 SPANXN3Q5MJ09 141 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 THOC7Q6I9Y2 204 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 NLRX1Q86UT6 975 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 CCDC117Q8IWD4 279 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 GRAMD1CQ8IYS0 662 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PQLC1Q8N2U9 271 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PRELID2Q8N945 189 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 ETNPPLQ8TBG4 499 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 AGR3Q8TD06 166 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 OXER1Q8TDS5 423 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 TTC9Q92623 222 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 RNF25Q96BH1 459 aaPredicted RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 DNAJC19Q96DA6 116 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 ABHD8Q96I13 439 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 RILPQ96NA2 401 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 MED15Q96RN5 788 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 TRIM56Q9BRZ2 755 aaKnown RBP5.34□□□□□ -1.55
CACNB4-227ENST00000636507 RHOBTB2Q9BYZ6 727 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 ADAMTS10Q9H324 1103 aa5.34□□□□□ -1.55
CACNB4-227ENST00000636507 PDZD7Q9H5P4 517 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms