RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 AOX1Q06278 1338 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 PCDH11XQ9BZA7 1347 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 PCDH11YQ9BZA8 1340 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 DRGXA6NNA5 263 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC16A6O15403 523 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 CREB3O43889 395 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SEC24DO94855 1032 aaPredicted RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 UBXN7O94888 489 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 ALDH2P05091 517 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 RPLP2P05387 115 aaKnown RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 ELFN1P0C7U0 828 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 MYBP10242 640 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC5A1P13866 664 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 XPAP23025 273 aaPredicted RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 NRG3P56975 720 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 CCT2P78371 535 aaKnown RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 MEF2AQ02078 507 aaPredicted RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 APBA1Q02410 837 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 DUSP2Q05923 314 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 PPP3CAQ08209 521 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SEMA5AQ13591 1074 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 DHX8Q14562 1220 aaKnown RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 LLGL1Q15334 1064 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 MAN2A1Q16706 1144 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 BMT2Q1RMZ1 405 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 C3orf36Q3SXR2 165 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 ANO6Q4KMQ2 910 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 C10orf62Q5T681 223 aaPredicted RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 EFCAB12Q6NXP0 572 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 DARS2Q6PI48 645 aaKnown RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 FAM180AQ6UWF9 173 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 NPNTQ6UXI9 565 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 CCDC149Q6ZUS6 474 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 COL23A1Q86Y22 540 aaPredicted RBP3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 GLB1L2Q8IW92 636 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.03□□□□□ -1.927e-7■■□□□ 13.6
SMARCB1-208ENST00000634926 OR56A1Q8NGH5 318 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC35B2Q8TB61 432 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 NRG4Q8WWG1 115 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 HDAC10Q969S8 669 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 CGRRF1Q99675 332 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 AIFM2Q9BRQ8 373 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 ADI1Q9BV57 179 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 SLC17A6Q9P2U8 582 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 INTUQ9ULD6 942 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 KAT6BQ8WYB5 2073 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 THSD7BQ9C0I4 1608 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 ADAMTSL1Q8N6G6 1762 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 DICER1Q9UPY3 1922 aaKnown RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 A0A1W2PR48 441 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 CAPN8A6NHC0 703 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 FAM171A2A8MVW0 826 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 GOLIM4O00461 696 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 FYB1O15117 783 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 SGTAO43765 313 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 GSPT1P15170 499 aaKnown RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 HTR1BP28222 390 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 SERPINB3P29508 390 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 ALDH5A1P51649 535 aaPredicted RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 CACNB3P54284 484 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 AK2P54819 239 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 FOXG1P55316 489 aaPredicted RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 DSC2Q02487 901 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 MGAT2Q10469 447 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 EIF2B5Q13144 721 aaKnown RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 ZRSR2Q15696 482 aaKnown RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 ETFDHQ16134 617 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 SRSF7Q16629 238 aaKnown RBP eCLIP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 KIAA0753Q2KHM9 967 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 C4orf46Q504U0 113 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 MTX3Q5HYI7 312 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 MFSD14BQ5SR56 506 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 THEMIS2Q5TEJ8 643 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 ZNF626Q68DY1 528 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 PPP4R3AQ6IN85 833 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 LMBR1LQ6UX01 489 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 ZNF517Q6ZMY9 492 aaPredicted RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 MIGA2Q7L4E1 593 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 TECPR1Q7Z6L1 1165 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 MAPKAPK5Q8IW41 473 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 KRT78Q8N1N4 520 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 GPR156Q8NFN8 814 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 TFAP2CQ92754 450 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 TNIP3Q96KP6 325 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 FCRL4Q96PJ5 515 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 MYD88Q99836 296 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 B3GNT5Q9BYG0 378 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 BHMT2Q9H2M3 363 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 NLRC4Q9NPP4 1024 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 RBM12Q9NTZ6 932 aaKnown RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 TERF2IPQ9NYB0 399 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 STXBP5LQ9Y2K9 1186 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 DAAM1Q9Y4D1 1078 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 FER1L6Q2WGJ9 1857 aa3.02□□□□□ -1.93
SMARCB1-208ENST00000634926 RPTORQ8N122 1335 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 IGSF1Q8N6C5 1336 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 A0A088AWK7 358 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 PHF2O75151 1096 aa3.01□□□□□ -1.93
SMARCB1-208ENST00000634926 TMEM127O75204 238 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms