RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 UBE3AQ05086 875 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 WDR49Q8IV35 697 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 ECSITQ9BQ95 431 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 ASCC2Q9H1I8 757 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 ADARB2Q9NS39 739 aaKnown RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 RUVBL2Q9Y230 463 aaKnown RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 IGF2BP3O00425 579 aaKnown RBP eCLIP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 SKAP2O75563 359 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 EGFRP00533 1210 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 RRM1P23921 792 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 PCYT1AP49585 367 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 MAP3K7CLP57077 242 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 CTXN3Q4LDR2 81 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 BTN2A2Q8WVV5 523 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 HPSEQ9Y251 543 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 CAPN6Q9Y6Q1 641 aa13.26□□□□□ -0.29
SCN8A-209ENST00000627620 INO80Q9ULG1 1556 aaPredicted RBP13.26□□□□□ -0.29
SCN8A-209ENST00000627620 KRT87PA6NCN2 255 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 WDR47O94967 919 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 TRPC1P48995 793 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 OXCT1P55809 520 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 KLC1Q07866 573 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 BBS7Q8IWZ6 715 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 DEAF1O75398 565 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 KCNA3P22001 575 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 NUDT2P50583 147 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 MYL6P60660 151 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 PLOD1Q02809 727 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 SEC23AQ15436 765 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 MRPS31Q92665 395 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 TUBGCP3Q96CW5 907 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 CNDP1Q96KN2 507 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 AP4E1Q9UPM8 1137 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 EIF3LQ9Y262 564 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 H2AFYO75367 372 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 THP07101 528 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 SERPINB8P50452 374 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 DEPDC1Q5TB30 811 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 SLC47A2Q86VL8 602 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 OOSP2Q86WS3 158 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 LRRC34Q8IZ02 419 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 HNRNPLLQ8WVV9 542 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 DNAJC9Q8WXX5 260 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 TMEM176AQ96HP8 235 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 CISHQ9NSE2 258 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 IARS2Q9NSE4 1012 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 C6orf203Q9P0P8 240 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 A0A087WZ62 844 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 NCF1BA6NI72 391 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 NCF1CA8MVU1 366 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 VPS26AO75436 327 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 NCF1P14598 390 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 SLC26A2P50443 739 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 EFEMP1Q12805 493 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 STX5Q13190 355 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 DDX39BQ13838 428 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 ADGRA1Q86SQ6 560 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 PNKPQ96T60 521 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 FDXACB1Q9BRP7 624 aaPredicted RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
SCN8A-209ENST00000627620 PHTF1Q9UMS5 762 aa13.25□□□□□ -0.29
SCN8A-209ENST00000627620 F8VZ95 297 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 DAB1O75553 588 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 AKAP3O75969 853 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 FBXO21O94952 628 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 CKMP06732 381 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 TP53BP2Q13625 1128 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 FIGNQ5HY92 759 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 TRIM48Q8IWZ4 208 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 SYTL5Q8TDW5 730 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 HASPINQ8TF76 798 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 SEPT8Q92599 483 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 KAZALD1Q96I82 304 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 VPS50Q96JG6 964 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 THUMPD3Q9BV44 507 aaKnown RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 DDX28Q9NUL7 540 aaKnown RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 WHRNQ9P202 907 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 FAM205AQ6ZU69 1335 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 PRR23AA6NEV1 266 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 TIMM44O43615 452 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 KRT8P05787 483 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 ALOX15P16050 662 aaPredicted RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 FGFR2P21802 821 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 S100A5P33763 92 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 NCALDP61601 193 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 CACHD1Q5VU97 1274 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 PAWRQ96IZ0 340 aaKnown RBP13.24□□□□□ -0.29
SCN8A-209ENST00000627620 PDCD2LQ9BRP1 358 aa13.24□□□□□ -0.29
SCN8A-209ENST00000627620 CNPY3Q9BT09 278 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms