RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CCDC39Q9UFE4 941 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.8□□□□□ -0.52
DDX41-218ENST00000625286 CPQQ9Y646 472 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 ATRXP46100 2492 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 ADAMTS9Q9P2N4 1935 aa11.8□□□□□ -0.52
DDX41-218ENST00000625286 FREM2Q5SZK8 3169 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 VPS37CA5D8V6 355 aaPredicted RBP11.79□□□□□ -0.52
DDX41-218ENST00000625286 CLDN5O00501 218 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 TGFB1I1O43294 461 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 NFATC1O95644 943 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 P2RY2P41231 377 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 PTGER3P43115 390 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 PGFP49763 221 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 NOP14P78316 857 aaKnown RBP11.79□□□□□ -0.52
DDX41-218ENST00000625286 TAF10Q12962 218 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 NR1H3Q13133 447 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 USP39Q53GS9 565 aaKnown RBP11.79□□□□□ -0.52
DDX41-218ENST00000625286 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 C4orf50Q6ZRC1 276 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 DENND5BQ6ZUT9 1274 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 EPM2AIP1Q7L775 607 aaPredicted RBP11.79□□□□□ -0.52
DDX41-218ENST00000625286 TRAPPC11Q7Z392 1133 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 FSIP1Q8NA03 581 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 TXNDC5Q8NBS9 432 aaKnown RBP11.79□□□□□ -0.52
DDX41-218ENST00000625286 ELMO3Q96BJ8 720 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 ZFRQ96KR1 1074 aaKnown RBP11.79□□□□□ -0.52
DDX41-218ENST00000625286 C8orf48Q96LL4 319 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 B3GNT5Q9BYG0 378 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 HSPBP1Q9NZL4 362 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 TRPM5Q9NZQ8 1165 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 BAHCC1Q9P281 2608 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 NBEAQ8NFP9 2946 aa11.79□□□□□ -0.52
DDX41-218ENST00000625286 CEP192Q8TEP8 1941 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 PLXND1Q9Y4D7 1925 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 ZNF233A6NK53 670 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
DDX41-218ENST00000625286 TRIM24O15164 1050 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 KAT7O95251 611 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 KLF8O95600 359 aaPredicted RBP11.78□□□□□ -0.52
DDX41-218ENST00000625286 PTPN1P18031 435 aaKnown RBP11.78□□□□□ -0.52
DDX41-218ENST00000625286 SYT1P21579 422 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 TIE1P35590 1138 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 GNL1P36915 607 aaPredicted RBP11.78□□□□□ -0.52
DDX41-218ENST00000625286 DHPSP49366 369 aaPredicted RBP11.78□□□□□ -0.52
DDX41-218ENST00000625286 MRPS21P82921 87 aaKnown RBP11.78□□□□□ -0.52
DDX41-218ENST00000625286 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 FOXC1Q12948 553 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 MYO1EQ12965 1108 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 E2F4Q16254 413 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 MAP7D1Q3KQU3 841 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 PAQR9Q6ZVX9 377 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 TTC30AQ86WT1 665 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 TMEFF1Q8IYR6 380 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 PDILTQ8N807 584 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 PLEKHO2Q8TD55 490 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 PIGKQ92643 395 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 ANKRD36BP1Q96IX9 119 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 KCNK16Q96T55 309 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 MMS19Q96T76 1030 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 ZNF518BQ9C0D4 1074 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 FSCN3Q9NQT6 498 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 CFAP97Q9P2B7 532 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 ZMIZ1Q9ULJ6 1067 aa11.78□□□□□ -0.52
DDX41-218ENST00000625286 TACC1O75410 805 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 ABL1P00519 1130 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 TNNC2P02585 160 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
DDX41-218ENST00000625286 PFKLP17858 780 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 CSRP1P21291 193 aaKnown RBP11.77□□□□□ -0.53
DDX41-218ENST00000625286 STAT6P42226 847 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 ALCAMQ13740 583 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 LY6G5CQ5SRR4 150 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 UNQ6494/PRO21346Q6UXR6 183 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 ARMCX6Q7L4S7 300 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 HS2ST1Q7LGA3 356 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 CYP2U1Q7Z449 544 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 WDR49Q8IV35 697 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 KDF1Q8NAX2 398 aaPredicted RBP11.77□□□□□ -0.53
DDX41-218ENST00000625286 DEFB124Q8NES8 71 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 SCAMP5Q8TAC9 235 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 ZNF507Q8TCN5 953 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 EXOC4Q96A65 974 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 PNKPQ96T60 521 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 XYLT2Q9H1B5 865 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 TMEM9BQ9NQ34 198 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 KBTBD4Q9NVX7 518 aa11.77□□□□□ -0.53
DDX41-218ENST00000625286 CHORDC1Q9UHD1 332 aaPredicted RBP11.77□□□□□ -0.53
DDX41-218ENST00000625286 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
DDX41-218ENST00000625286 TNFRSF10BO14763 440 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 TRIM66O15016 1216 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 CLIC2O15247 247 aa11.76□□□□□ -0.53
DDX41-218ENST00000625286 COCHO43405 550 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms