RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TRIP13Q15645 432 aaPredicted RBP8.24□□□□□ -1.09
VPS11-209ENST00000622309 TIGD2Q4W5G0 525 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 SIGIRRQ6IA17 410 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 NANOGP8Q6NSW7 305 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 RFPL4BQ6ZWI9 263 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 CLVS1Q8IUQ0 354 aaPredicted RBP8.24□□□□□ -1.09
VPS11-209ENST00000622309 C4orf32Q8N8J7 132 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 MIGA1Q8NAN2 632 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 PTCD2Q8WV60 388 aaKnown RBP8.24□□□□□ -1.09
VPS11-209ENST00000622309 TMIGD2Q96BF3 282 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 CCDC124Q96CT7 223 aaKnown RBP8.24□□□□□ -1.09
VPS11-209ENST00000622309 CALML4Q96GE6 196 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 KIAA1586Q9HCI6 787 aa8.24□□□□□ -1.09
VPS11-209ENST00000622309 ALG13Q9NP73 1137 aaKnown RBP8.24□□□□□ -1.09
VPS11-209ENST00000622309 TBKBP1A7MCY6 615 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 SPOPO43791 374 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A9O60656 530 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PLEKHA8P1O95397 391 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ZNF23P17027 643 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 DDX5P17844 614 aaKnown RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A6P19224 532 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A1P22309 533 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A4P22310 534 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A3P35503 534 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A5P35504 534 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ADCY8P40145 1251 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 CTSWP56202 376 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ITGADQ13349 1161 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PRKG1Q13976 671 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 RARS2Q5T160 578 aaKnown RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 CENPUQ71F23 418 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PRPF39Q86UA1 669 aaKnown RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 MMAAQ8IVH4 418 aaKnown RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 ANKRD49Q8WVL7 239 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 SLC39A13Q96H72 371 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 CFAP57Q96MR6 1250 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 MTMR12Q9C0I1 747 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A7Q9HAW7 530 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A10Q9HAW8 530 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UGT1A8Q9HAW9 530 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PARVGQ9HBI0 331 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 SACM1LQ9NTJ5 587 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 NCKIPSDQ9NZQ3 722 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 HACD3Q9P035 362 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 DSEQ9UL01 958 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PLA2G4CQ9UP65 541 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 IFT52Q9Y366 437 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ZNF532Q9HCE3 1301 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 SHANK3Q9BYB0 1731 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 TOGARAM1Q9Y4F4 1720 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 H3BNX3 289 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ACSL4O60488 711 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 GUCY1B2O75343 617 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 UCHL3P15374 230 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ADRA1DP25100 572 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 RFC1P35251 1148 aaPredicted RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 MCAMP43121 646 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PHKA1P46020 1223 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 EFTUD2Q15029 972 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS11-209ENST00000622309 CCDC81Q6ZN84 652 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 KRT77Q7Z794 578 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ALYREFQ86V81 257 aaKnown RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 KIAA2013Q8IYS2 634 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 IFNL3Q8IZI9 196 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 ESX1Q8N693 406 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 CCDC89Q8N998 374 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PCYOX1LQ8NBM8 494 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 LILRB4Q8NHJ6 448 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 CAPSLQ8WWF8 208 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 LRGUKQ96M69 825 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 EPS15L1Q9UBC2 864 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PCDHGB4Q9UN71 923 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 PCDHGB5Q9Y5G0 923 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 MAGED1Q9Y5V3 778 aaPredicted RBP8.23□□□□□ -1.09
VPS11-209ENST00000622309 SQORQ9Y6N5 450 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 EMSYQ7Z589 1322 aa8.23□□□□□ -1.09
VPS11-209ENST00000622309 SGTAO43765 313 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 DDHD2O94830 711 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 TMEM253P0C7T8 217 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 FGFR1P11362 822 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 P4HA1P13674 534 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 PLS3P13797 630 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 CHRNB2P17787 502 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 CALML3P27482 149 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 POLD2P49005 469 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 CENPAP49450 140 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 PPATQ06203 517 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 MTMR2Q13614 643 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 GJC2Q5T442 439 aaPredicted RBP8.22□□□□□ -1.09
VPS11-209ENST00000622309 SUSD4Q5VX71 490 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 PLEKHA7Q6IQ23 1121 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 RNF207Q6ZRF8 634 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 CYP2U1Q7Z449 544 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 GPR141Q7Z602 305 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 CATSPER1Q8NEC5 780 aa8.22□□□□□ -1.09
VPS11-209ENST00000622309 MED30Q96HR3 178 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms