RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 GALNT5Q7Z7M9 940 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 INPP4AQ96PE3 977 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 GCOM2Q9BZD3 368 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 MTFR1LQ9H019 292 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ALDH8A1Q9H2A2 487 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 KCNQ5Q9NR82 932 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 UMODL1Q5DID0 1318 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PCDH11YQ9BZA8 1340 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TBKBP1A7MCY6 615 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 SERPINH1P50454 418 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZC3H12BQ5HYM0 836 aaKnown RBP5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TBCELQ5QJ74 424 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PMEPA1Q969W9 287 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 TUBGCP3Q96CW5 907 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZBTB18Q99592 522 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 NINJ2Q9NZG7 142 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 ZBTB1Q9Y2K1 713 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PTCH1Q13635 1447 aa5.22□□□□□ -1.57
VPS13D-214ENST00000620676 PIPSLA2A3N6 862 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 LRRIQ4A6NIV6 560 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 MIF4GDA9UHW6 222 aaKnown RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 F7P08709 466 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 TPTEP56180 551 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 RAB25P57735 213 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 ATP2C1P98194 919 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 SLCO6A1Q86UG4 719 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 HPS6Q86YV9 775 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 C7orf31Q8N865 590 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 CACYBPQ9HB71 228 aaKnown RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 WHRNQ9P202 907 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 PRR5-ARHGAP8B1AHC4 643 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 HNRNPDLO14979 420 aaKnown RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 TAL1P17542 331 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 CYP11B2P19099 503 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 RCVRNP35243 200 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 ARHGAP8P85298 464 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 PPATQ06203 517 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 C6orf10Q5SRN2 563 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 FIG4Q92562 907 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 COPRSQ9NQ92 184 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 TUBA8Q9NY65 449 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 SYNPO2Q9UMS6 1093 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 MYO1DO94832 1006 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 ADRM1Q16186 407 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 THEMISQ8N1K5 641 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 MAB21L3Q8N8X9 362 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 RNF26Q9BY78 433 aaPredicted RBP5.21□□□□□ -1.57
VPS13D-214ENST00000620676 S100A14Q9HCY8 104 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 PPM1HQ9ULR3 514 aa5.21□□□□□ -1.57
VPS13D-214ENST00000620676 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 C12orf71A8MTZ7 269 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 UQCRBP14927 111 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TBC1D25Q3MII6 688 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 VWA5B1Q5TIE3 1220 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 BORCS5Q969J3 196 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 MAN1C1Q9NR34 630 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CYP7B1O75881 506 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 FYNP06241 537 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CRADDP78560 199 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TAB1Q15750 504 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SCARA3Q6AZY7 606 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 FAM228AQ86W67 206 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CHSY1Q86X52 802 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 OSCP1Q8WVF1 389 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 GPATCH8Q9UKJ3 1502 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TMEM191CA6NGB0 347 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CCDC153Q494R4 210 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ALFQ53S48 1182 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PHC2Q8IXK0 858 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 C19orf18Q8NEA5 215 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CADM1Q9BY67 442 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ANKRD63C9JTQ0 380 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CDK16Q00536 496 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CD302Q8IX05 232 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TERB1Q8NA31 727 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PAWRQ96IZ0 340 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 KCNS3Q9BQ31 491 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 AP4E1Q9UPM8 1137 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 YARS2Q9Y2Z4 477 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TRPM2O94759 1503 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CRTAMO95727 393 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 MYCP01106 439 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 CALB1P05937 261 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PRKCIP41743 596 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 SRP54P61011 504 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 IL5RAQ01344 420 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 RBM23Q86U06 439 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 KYQ8NBH2 561 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ACTRT1Q8TDG2 376 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ARHGEF26Q96DR7 871 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 NAP1L4Q99733 375 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 TDRD1Q9BXT4 1180 aaKnown RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 EBF2Q9HAK2 575 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 GIN1Q9NXP7 522 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 ZNF652Q9Y2D9 606 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 HSPA13P48723 471 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 PSMC5P62195 406 aa5.21□□□□□ -1.58
VPS13D-214ENST00000620676 GIMAP8Q8ND71 665 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 NOS1APO75052 506 aaPredicted RBP5.21□□□□□ -1.58
VPS13D-214ENST00000620676 HIBADHP31937 336 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms